CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 6
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71914	Soybean	nucleus, plastid	81.77	85.2
KRG95361	Soybean	nucleus	66.76	69.36
KRH67040	Soybean	nucleus	68.1	69.21
VIT_08s0007g06270.t01	Wine grape	nucleus	57.37	56.46
PGSC0003DMT400029751	Potato	nucleus	45.58	45.7
Solyc10g078700.1.1	Tomato	nucleus	45.58	45.7
GSMUA_Achr4P03880_001	Banana	nucleus	34.85	45.61
KRH21401	Soybean	nucleus	16.35	44.2
GSMUA_Achr7P20510_001	Banana	nucleus	39.95	43.7
KRH20415	Soybean	nucleus	16.62	43.66
KRH10909	Soybean	nucleus	16.09	43.48
KRH50085	Soybean	nucleus	16.89	43.15
AT2G42200.1	Thale cress	nucleus	40.75	40.53
CDY06881	Canola	nucleus	39.41	40.5
Bra016891.1-P	Field mustard	nucleus	39.41	40.5
CDY14818	Canola	nucleus	39.41	40.05
CDX79888	Canola	nucleus	39.14	39.67
GSMUA_Achr9P22260_001	Banana	nucleus	35.66	38.78
CDY53504	Canola	nucleus	38.34	38.65
Bra004674.1-P	Field mustard	nucleus	38.07	38.48
CDX67715	Canola	nucleus	32.17	37.97
CDX98259	Canola	nucleus	32.98	37.85
Bra003305.1-P	Field mustard	nucleus	31.9	37.66
CDY61750	Canola	nucleus	30.56	37.01
CDY47656	Canola	nucleus	31.64	36.42
KRH27270	Soybean	nucleus	17.96	35.83
KRH22053	Soybean	nucleus	17.69	35.29
KRG88952	Soybean	nucleus	21.18	35.27
GSMUA_Achr8P25550_001	Banana	nucleus	32.44	35.17
KRH55227	Soybean	nucleus	17.43	35.14
KRH28893	Soybean	nucleus	13.67	34.93
GSMUA_Achr6P22280_001	Banana	nucleus	38.34	34.79
Bra014599.1-P	Field mustard	nucleus	28.15	34.77
GSMUA_Achr9P20220_001	Banana	nucleus	22.79	34.55
KRG88838	Soybean	nucleus	17.43	34.21
AT3G57920.1	Thale cress	nucleus	31.9	33.62
GSMUA_Achr7P02020_001	Banana	nucleus	31.1	33.53
GSMUA_Achr4P01450_001	Banana	nucleus	31.9	33.33
GSMUA_Achr9P27660_001	Banana	nucleus	32.71	33.06
KRH22367	Soybean	nucleus	13.67	32.28
Zm00001d020941_P001	Maize	nucleus	32.44	32.01
TraesCS7B01G144900.1	Wheat	nucleus	32.98	31.87
TraesCS7D01G245200.2	Wheat	nucleus	32.71	31.69
TraesCS7A01G246500.1	Wheat	nucleus	32.71	31.61
EER99092	Sorghum	nucleus	32.71	31.44
GSMUA_Achr3P11170_001	Banana	nucleus	31.9	30.67
TraesCS5B01G265600.2	Wheat	nucleus	32.17	30.3
TraesCS5D01G273900.2	Wheat	nucleus	32.44	29.66
Zm00001d006028_P001	Maize	nucleus	30.29	29.5
TraesCS5A01G265900.2	Wheat	nucleus	32.44	29.44
Os08t0509600-01	Rice	nucleus	32.17	28.78
Zm00001d052890_P001	Maize	nucleus	31.37	28.68
HORVU5Hr1G073440.7	Barley	nucleus	31.9	28.61
EES14266	Sorghum	nucleus	31.1	28.36
Zm00001d031451_P001	Maize	nucleus	30.03	27.79
Os09t0491532-01	Rice	nucleus	23.86	27.55
KRH75287	Soybean	nucleus	22.25	24.13
KRH63786	Soybean	nucleus	23.32	23.45
KRH75288	Soybean	nucleus	17.96	23.34
KRH66611	Soybean	nucleus	20.64	22.92
KRG97402	Soybean	nucleus	26.54	22.86
KRH59812	Soybean	nucleus	23.86	22.82
KRH66613	Soybean	nucleus	20.91	22.81
KRH48746	Soybean	nucleus	20.91	22.81
KRH48747	Soybean	nucleus	20.64	22.78
KRH06918	Soybean	nucleus	22.25	22.74
KRG94562	Soybean	nucleus	22.25	22.74
KRH31506	Soybean	nucleus	26.54	22.35
KRH41121	Soybean	nucleus	23.59	22.22
KRH54164	Soybean	nucleus	24.13	21.74
KRH54739	Soybean	nucleus	21.72	21.32
KRH75117	Soybean	nucleus	25.2	19.46
KRH70968	Soybean	nucleus	24.4	18.88
KRH07602	Soybean	nucleus	10.72	18.52
KRH63174	Soybean	nucleus	26.27	17.38
KRH56776	Soybean	nucleus	25.47	17.3
KRH03167	Soybean	nucleus	24.93	17.1

Protein Annotations

EntrezGene:100789301	MapMan:15.5.18	Gene3D:4.10.1100.10	EMBL:ACUP02005636	EnsemblPlantsGene:GLYMA_09G113800	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0046872	UniProt:I1N2A2	InterPro:IPR004333	InterPro:IPR036893	EnsemblPlants:KRH38141
ProteinID:KRH38141	ProteinID:KRH38141.1	PFAM:PF03110	PFscan:PS51141	PANTHER:PTHR31251	PANTHER:PTHR31251:SF56
InterPro:SBP_dom	InterPro:SBP_sf	SUPFAM:SSF103612	UniParc:UPI000233F53F	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:+:23421692..23426741

Molecular Weight (calculated)

40035.7 Da

IEP (calculated)

9.093

GRAVY (calculated)

-0.524

Length

373 amino acids

Sequence
(BLAST)

001: MSSGSVTKAP PPSSSSSPNS SSESLDGLKF GQKIYFEDVS VAATTTTQGA YKTSRVVSSP SSASKKGRGG SLQPPRCQVE GCKVDLSGAK AYYSRHKVCT
101: MHSKFPTVIV AGLEQRFCQQ CSRFHLLSEF DEGKRSCRRR LAGHNERRRK PPPSSTLASH YGRLSTPIFD NSGRAGGFLM EFASYPKVTL RNTLPTQRSA
201: EPALGNHAAT LTWQGSSDTP SEFFLQESGS GGTSFLGSKH PLLESYTGVT DSNCALSLLS RQTWGSRNTA PATSVELNNN LLNFNGTSMT QFSAASSQTA
301: AIHQLPNATS WLYLKGVGSG DCSPEGVPDL GLGQISPPLD SHLHGELNVS QQGRRHYMDL GESRACESSH WSL

Best Arabidopsis Sequence Match ( AT2G42200.1 )
(BLAST)

001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL

Arabidopsis Description

SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.