Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P25550_001 | Banana | nucleus | 71.82 | 77.03 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 65.04 | 61.86 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 49.86 | 53.18 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 48.24 | 49.86 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 28.73 | 37.19 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 33.33 | 36.07 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 17.89 | 35.29 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 14.36 | 34.64 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 22.49 | 33.74 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 17.07 | 33.69 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 34.15 | 33.25 |
| PGSC0003DMT400029751 | Potato | nucleus | 33.33 | 33.06 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 30.62 | 32.94 |
| KRG95361 | Soybean | nucleus | 31.98 | 32.87 |
| Solyc10g078700.1.1 | Tomato | nucleus | 33.06 | 32.8 |
| KRH38141 | Soybean | nucleus, plastid | 33.06 | 32.71 |
| KRH71914 | Soybean | nucleus, plastid | 31.71 | 32.68 |
| KRH67040 | Soybean | nucleus | 31.98 | 32.15 |
| CDX98259 | Canola | nucleus | 26.29 | 29.85 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 33.06 | 29.68 |
| CDX79888 | Canola | nucleus | 29.54 | 29.62 |
| CDY53504 | Canola | nucleus | 29.54 | 29.46 |
| AT2G42200.1 | Thale cress | nucleus | 29.81 | 29.33 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 17.07 | 29.3 |
| CDY06881 | Canola | nucleus | 28.46 | 28.93 |
| Bra016891.1-P | Field mustard | nucleus | 28.46 | 28.93 |
| CDY61750 | Canola | nucleus | 24.12 | 28.9 |
| CDY47656 | Canola | nucleus | 25.2 | 28.7 |
| CDY14818 | Canola | nucleus | 28.46 | 28.61 |
| AT3G57920.1 | Thale cress | nucleus | 27.37 | 28.53 |
| GSMUA_Achr10P... | Banana | nucleus | 17.62 | 28.51 |
| Bra003305.1-P | Field mustard | nucleus | 24.39 | 28.48 |
| Bra004674.1-P | Field mustard | nucleus | 28.46 | 28.46 |
| CDX67715 | Canola | nucleus | 24.12 | 28.16 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 18.7 | 27.06 |
| Bra014599.1-P | Field mustard | nucleus | 21.95 | 26.82 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 18.7 | 25.37 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 21.68 | 25.16 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 19.78 | 25.09 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 18.43 | 24.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.76 | 23.8 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.49 | 23.71 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 22.22 | 23.7 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 23.85 | 23.59 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 20.05 | 23.2 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 20.6 | 23.17 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 21.95 | 23.14 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 23.04 | 23.04 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 21.41 | 22.77 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 23.85 | 22.39 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 21.68 | 22.22 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 24.93 | 22.12 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 21.14 | 22.03 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.95 | 21.77 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 22.49 | 21.73 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 26.83 | 21.62 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 23.85 | 21.31 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 24.39 | 20.79 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 25.47 | 20.26 |
| GSMUA_Achr11P... | Banana | nucleus | 22.49 | 20.0 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 24.39 | 19.19 |
| GSMUA_Achr10P... | Banana | nucleus | 24.93 | 18.89 |
| GSMUA_Achr10P... | Banana | nucleus | 25.75 | 18.85 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 22.22 | 18.72 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 22.22 | 18.06 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 24.66 | 17.27 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr9G27660_001 |
| EnsemblPlants:GSMUA_Achr9P27660_001 | EnsemblPlants:GSMUA_Achr9T27660_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0U423 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF67 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI0002958E17 | SEG:seg | : | : | : | : |
Description
Putative Squamosa promoter-binding-like protein 17 [Source:GMGC_GENE;Acc:GSMUA_Achr9G27660_001]
Coordinates
chr9:+:31878815..31882081
Molecular Weight (calculated)
39366.1 Da
IEP (calculated)
8.198
GRAVY (calculated)
-0.518
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MDERCLETTG ASTGSGDTLH GLKFGQKIYF EDGGGGGGSG SGSSSKPPLA PIKEGAAPSP PGKKGKGVAQ GGLQQPPRCQ VEGCNADLTG VKAYYCRHKV
101: CGMHSKAPKV IVAGLEQRFC QQCSRFHLLP EFDQGKRSCR RRLAGHNERR RKPPPGTFAS CYGRFASSFH EEPGRFKSFL VDFSHPKFSS SARDVWPTAR
201: AGDRVVTDEW HGVLDAPTHA ALLRTCPCYQ GPLAGNFCSP VELPPGEVLA GVSDSSCALS LLSTHSWSSN SARNLSVNPA NSTFVVPPPS TRSVIPGNST
301: TTSWGLRSHG GRTIPHEIQH EMGLAEETEA SDAHFSHQVG FAPHENGQCL DHGSGRACDH SVPGMHWSL
101: CGMHSKAPKV IVAGLEQRFC QQCSRFHLLP EFDQGKRSCR RRLAGHNERR RKPPPGTFAS CYGRFASSFH EEPGRFKSFL VDFSHPKFSS SARDVWPTAR
201: AGDRVVTDEW HGVLDAPTHA ALLRTCPCYQ GPLAGNFCSP VELPPGEVLA GVSDSSCALS LLSTHSWSSN SARNLSVNPA NSTFVVPPPS TRSVIPGNST
301: TTSWGLRSHG GRTIPHEIQH EMGLAEETEA SDAHFSHQVG FAPHENGQCL DHGSGRACDH SVPGMHWSL
001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
Arabidopsis Description
SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.