Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P29330_001 | Banana | nucleus | 58.27 | 56.28 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 56.37 | 55.76 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.24 | 50.86 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 52.85 | 49.62 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 42.28 | 48.9 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 19.51 | 47.06 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.34 | 45.97 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.82 | 44.76 |
| GSMUA_Achr11P... | Banana | nucleus | 45.8 | 40.72 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 44.17 | 39.47 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 38.21 | 39.17 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 34.96 | 34.13 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 16.8 | 33.16 |
| KRG94562 | Soybean | nucleus | 31.44 | 31.78 |
| KRH06918 | Soybean | nucleus | 31.44 | 31.78 |
| GSMUA_Achr10P... | Banana | nucleus | 19.24 | 31.14 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 15.45 | 30.48 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 16.8 | 28.84 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 19.51 | 28.24 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 20.87 | 27.02 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 20.05 | 27.01 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 19.51 | 26.47 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 23.85 | 25.81 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 19.51 | 24.74 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 23.04 | 24.57 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 22.22 | 23.84 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 21.68 | 23.32 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 23.04 | 23.04 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 21.95 | 22.88 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 21.14 | 22.54 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 20.87 | 22.19 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 14.63 | 21.95 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 19.24 | 21.65 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 20.33 | 21.43 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 18.43 | 21.38 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 20.33 | 21.01 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 21.14 | 20.1 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 22.22 | 19.95 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 23.04 | 19.41 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 22.76 | 19.4 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 20.87 | 18.51 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 22.49 | 17.89 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 21.95 | 17.84 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 22.22 | 17.48 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 21.68 | 17.47 |
| GSMUA_Achr10P... | Banana | nucleus | 21.41 | 16.22 |
| GSMUA_Achr10P... | Banana | nucleus | 21.95 | 16.07 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 21.41 | 14.99 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 1.36 | 8.62 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr6G06030_001 |
| EnsemblPlants:GSMUA_Achr6P06030_001 | EnsemblPlants:GSMUA_Achr6T06030_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0T4K1 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF29 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI000296EFC1 | SEG:seg | : | : | : | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G06030_001]
Coordinates
chr6:+:4064632..4066893
Molecular Weight (calculated)
39955.1 Da
IEP (calculated)
7.760
GRAVY (calculated)
-0.451
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWNAKISSW VFPEVEQVAD KNMEFLLGSS FVLGSQNSTG MDCSVDLKLG GLGDIRPAEK SRSQPSMTTT AVGPSRRARA QGNAPQNASC SVDGCKADLS
101: GSREYHRRHK VCEVHSKTPV VMVGGQEQRF CQQCSRFHQL VEFDEAKRSC RKRLDGHNRR RRKPPPDSIN PGGLLPNHQG SRFLMHPHLL PTPIQSHNWA
201: GIIESEDMLH TNHSPLTFVD SKQHLSGSFS SNENRKQVPL LQGDIAGFSI TTRLPFLMTI SSSTAESSSG NICALSLLSS ATKPGINADQ MLPADGVPMH
301: QSLVSSLPCH SSPQASTYVL PTGVSCSGVE DGQLIVRGAD ASLHCQSVFH AGGEGSSDWG SQAPPFSWQ
101: GSREYHRRHK VCEVHSKTPV VMVGGQEQRF CQQCSRFHQL VEFDEAKRSC RKRLDGHNRR RRKPPPDSIN PGGLLPNHQG SRFLMHPHLL PTPIQSHNWA
201: GIIESEDMLH TNHSPLTFVD SKQHLSGSFS SNENRKQVPL LQGDIAGFSI TTRLPFLMTI SSSTAESSSG NICALSLLSS ATKPGINADQ MLPADGVPMH
301: QSLVSSLPCH SSPQASTYVL PTGVSCSGVE DGQLIVRGAD ASLHCQSVFH AGGEGSSDWG SQAPPFSWQ
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.