Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P01380_001 | Banana | nucleus | 60.73 | 62.2 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 56.28 | 58.27 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 52.88 | 51.4 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.6 | 50.86 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 19.63 | 49.02 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 40.31 | 48.28 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.5 | 45.7 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.36 | 44.76 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 45.29 | 41.89 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 37.7 | 40.0 |
| GSMUA_Achr11P... | Banana | nucleus | 41.1 | 37.83 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 33.77 | 34.13 |
| KRH06918 | Soybean | nucleus | 31.94 | 33.42 |
| KRG94562 | Soybean | nucleus | 31.68 | 33.15 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 15.71 | 32.09 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 15.18 | 31.02 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 15.71 | 27.91 |
| GSMUA_Achr10P... | Banana | nucleus | 16.49 | 27.63 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 19.63 | 27.37 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 17.8 | 26.67 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 19.11 | 25.61 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 18.06 | 25.37 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 22.51 | 25.22 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 22.25 | 24.78 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 18.32 | 24.05 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 21.2 | 23.34 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 20.94 | 23.26 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 20.94 | 23.12 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 21.73 | 22.49 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 20.16 | 21.75 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 19.11 | 21.1 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 19.37 | 20.73 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 18.59 | 20.29 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 16.75 | 20.13 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 20.16 | 19.85 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 21.2 | 19.71 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 16.75 | 19.51 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 12.57 | 19.51 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 21.99 | 19.18 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 20.94 | 18.48 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 19.9 | 18.27 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 21.47 | 18.06 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 21.47 | 17.9 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 21.47 | 17.48 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 21.2 | 17.46 |
| GSMUA_Achr10P... | Banana | nucleus | 20.94 | 15.87 |
| GSMUA_Achr10P... | Banana | nucleus | 19.9 | 15.61 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 20.16 | 14.61 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 1.31 | 8.62 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr9G29330_001 |
| EnsemblPlants:GSMUA_Achr9P29330_001 | EnsemblPlants:GSMUA_Achr9T29330_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0U4J0 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF33 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI00029699D1 | SEG:seg | : | : | : | : |
Description
Putative OsSPL16 - SBP-box gene family member, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G29330_001]
Coordinates
chr9:-:33053993..33055744
Molecular Weight (calculated)
41741.0 Da
IEP (calculated)
8.700
GRAVY (calculated)
-0.655
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWNPNKLLS WGFSGLEQQK AELTMGSLVE RSRGLGSQTS EMDCSVDLKL GGSAGFRPPE KWRSQATTAT TKAAASGPPR RARAPGNAGQ TAACLVDGCK
101: SDLSNSREYH RRHKVCEVHS KTPVVMVGGQ EQRFCQQCSR FHQLEEFDEV KRSCRKRLDG HNKRRRKPQP GSTSPGSLFP NHHQGSSRYL MYPHLLPTPR
201: EEHNWPAIYT THLPLHAVDS QQQLSVPFCG NQDGKQLPLL QHGNTAFGRT TMEPPTRQPF LKTESSSSSN NKILSHGDCA LSLLSSTPSP GVAVGMGQML
301: PAGRIPVHHQ PLVSSLPYNH LDRYASSQAS SYVSQTGFSY SGFEDAVLVG DADTDLHCQS TVHVGGDGSS VGASQPLPFS WQ
101: SDLSNSREYH RRHKVCEVHS KTPVVMVGGQ EQRFCQQCSR FHQLEEFDEV KRSCRKRLDG HNKRRRKPQP GSTSPGSLFP NHHQGSSRYL MYPHLLPTPR
201: EEHNWPAIYT THLPLHAVDS QQQLSVPFCG NQDGKQLPLL QHGNTAFGRT TMEPPTRQPF LKTESSSSSN NKILSHGDCA LSLLSSTPSP GVAVGMGQML
301: PAGRIPVHHQ PLVSSLPYNH LDRYASSQAS SYVSQTGFSY SGFEDAVLVG DADTDLHCQS TVHVGGDGSS VGASQPLPFS WQ
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.