Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- plastid 2
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P08440_001 | Banana | nucleus | 35.29 | 28.88 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 33.33 | 27.27 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 53.59 | 25.71 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 35.29 | 25.12 |
| GSMUA_AchrUn_... | Banana | nucleus | 51.63 | 22.57 |
| GSMUA_Achr10P... | Banana | nucleus | 32.03 | 21.49 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 52.29 | 21.45 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 35.29 | 21.18 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.98 | 20.97 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 50.98 | 20.63 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 36.6 | 20.44 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.06 | 20.4 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 52.29 | 20.36 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 35.29 | 19.85 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 49.02 | 19.63 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 47.06 | 19.51 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 45.75 | 19.44 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 36.6 | 19.24 |
| KRH06918 | Soybean | nucleus | 45.75 | 19.18 |
| GSMUA_Achr11P... | Banana | nucleus | 50.98 | 18.8 |
| KRG94562 | Soybean | nucleus | 44.44 | 18.63 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 32.68 | 17.54 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 45.75 | 16.95 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 36.6 | 16.14 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 35.95 | 15.9 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 33.99 | 15.85 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 32.68 | 15.72 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 34.64 | 15.32 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 35.29 | 15.25 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 33.99 | 15.25 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 33.33 | 14.87 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 33.99 | 14.86 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 33.33 | 14.83 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 34.64 | 14.36 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 33.33 | 14.29 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 37.91 | 13.39 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 35.95 | 13.38 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 35.95 | 12.56 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 31.37 | 12.37 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 33.33 | 12.26 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 36.6 | 12.07 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 35.95 | 12.01 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 36.6 | 11.94 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 35.29 | 11.89 |
| GSMUA_Achr10P... | Banana | nucleus | 35.95 | 11.29 |
| GSMUA_Achr10P... | Banana | nucleus | 35.29 | 10.71 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 35.29 | 10.25 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 16.34 | 10.16 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 1.31 | 3.45 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr6G27520_001 |
| EnsemblPlants:GSMUA_Achr6P27520_001 | EnsemblPlants:GSMUA_Achr6T27520_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0TAP7 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI0002963061 |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G27520_001]
Coordinates
chr6:-:28014275..28017067
Molecular Weight (calculated)
17809.4 Da
IEP (calculated)
10.000
GRAVY (calculated)
-0.525
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYIFACHFF QKLILHFPFV SSSGARKRAQ PPSTASRNRV WCLVDGCRSD LRNCREYHRR HKVCELHSKT PVVMVGGVEQ RFCQQCSRFH PLVEFDEVKR
101: SCRKRLDGHN QRRRKPRSEE ASTASACLHP LPPGFIFSSL VSLSFNRTCD DYF
101: SCRKRLDGHN QRRRKPRSEE ASTASACLHP LPPGFIFSSL VSLSFNRTCD DYF
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.