Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr9P29330_001 | Banana | nucleus | 62.2 | 60.73 |
GSMUA_Achr6P06030_001 | Banana | nucleus | 55.76 | 56.37 |
GSMUA_Achr6P27520_001 | Banana | plastid | 21.45 | 52.29 |
GSMUA_AchrUn_... | Banana | nucleus | 48.79 | 52.0 |
GSMUA_Achr2P06150_001 | Banana | nucleus | 52.28 | 49.62 |
GSMUA_AchrUn_... | Banana | nucleus | 49.33 | 49.46 |
GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 41.82 | 48.9 |
GSMUA_AchrUn_... | Banana | nucleus | 46.11 | 48.73 |
GSMUA_Achr5P25090_001 | Banana | nucleus | 47.19 | 42.62 |
GSMUA_Achr4P16050_001 | Banana | nucleus | 40.48 | 41.94 |
GSMUA_Achr11P... | Banana | nucleus | 42.09 | 37.83 |
VIT_14s0068g01780.t01 | Wine grape | nucleus | 34.85 | 34.39 |
KRG94562 | Soybean | nucleus | 32.17 | 32.88 |
KRH06918 | Soybean | nucleus | 32.17 | 32.88 |
GSMUA_Achr1P08440_001 | Banana | nucleus | 16.35 | 32.62 |
GSMUA_Achr4P23650_001 | Banana | nucleus | 15.82 | 31.55 |
GSMUA_Achr2P03070_001 | Banana | nucleus | 16.09 | 27.91 |
GSMUA_Achr4P03880_001 | Banana | nucleus | 20.91 | 27.37 |
GSMUA_Achr10P... | Banana | nucleus | 16.62 | 27.19 |
GSMUA_Achr3P00810_001 | Banana | nucleus | 18.5 | 27.06 |
GSMUA_Achr7P05010_001 | Banana | nucleus | 19.3 | 26.28 |
GSMUA_Achr7P20510_001 | Banana | nucleus | 22.52 | 24.63 |
GSMUA_Achr4P20590_001 | Banana | nucleus | 17.96 | 24.63 |
GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 19.03 | 24.4 |
GSMUA_Achr8P25550_001 | Banana | nucleus | 22.25 | 24.13 |
GSMUA_Achr9P27660_001 | Banana | nucleus | 23.59 | 23.85 |
GSMUA_Achr7P02020_001 | Banana | nucleus | 21.72 | 23.41 |
GSMUA_Achr4P26940_001 | Banana | nucleus | 21.72 | 23.34 |
GSMUA_Achr9P22260_001 | Banana | nucleus | 20.64 | 22.45 |
GSMUA_Achr2P11940_001 | Banana | nucleus | 18.5 | 21.7 |
GSMUA_Achr4P24610_001 | Banana | nucleus | 18.5 | 21.04 |
GSMUA_Achr4P01450_001 | Banana | nucleus | 19.84 | 20.73 |
GSMUA_Achr7P08750_001 | Banana | nucleus | 19.57 | 20.62 |
GSMUA_Achr3P11170_001 | Banana | nucleus | 21.45 | 20.62 |
GSMUA_Achr4P05720_001 | Banana | nucleus | 18.77 | 20.23 |
GSMUA_Achr5P21990_001 | Banana | nucleus | 23.32 | 20.09 |
GSMUA_Achr4P12470_001 | Banana | nucleus | 18.77 | 20.0 |
GSMUA_Achr6P22280_001 | Banana | nucleus | 21.72 | 19.71 |
GSMUA_Achr6P36010_001 | Banana | nucleus | 23.06 | 19.63 |
GSMUA_Achr9P14160_001 | Banana | nucleus | 23.59 | 19.21 |
GSMUA_Achr9P20220_001 | Banana | nucleus | 12.06 | 18.29 |
GSMUA_Achr3P05360_001 | Banana | nucleus | 22.52 | 18.1 |
GSMUA_Achr9P23140_001 | Banana | nucleus | 20.11 | 18.03 |
GSMUA_Achr5P22630_001 | Banana | nucleus | 21.72 | 17.84 |
GSMUA_Achr10P... | Banana | nucleus | 22.79 | 17.45 |
GSMUA_Achr3P27750_001 | Banana | nucleus | 20.64 | 16.42 |
GSMUA_Achr10P... | Banana | nucleus | 21.72 | 16.07 |
GSMUA_Achr8P23820_001 | Banana | nucleus | 21.18 | 14.99 |
CDX80286 | Canola | cytosol, nucleus, plasma membrane | 1.34 | 8.62 |
Protein Annotations
MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr9G01380_001 |
EnsemblPlants:GSMUA_Achr9P01380_001 | EnsemblPlants:GSMUA_Achr9T01380_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0TWJ5 | PFAM:PF03110 |
PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF29 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
UniParc:UPI000295ABAA | SEG:seg | : | : | : | : |
Description
Putative OsSPL16 - SBP-box gene family member, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G01380_001]
Coordinates
chr9:+:1057548..1060950
Molecular Weight (calculated)
40794.5 Da
IEP (calculated)
8.155
GRAVY (calculated)
-0.406
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWNPKLPSR DFAEVEQNAE LHMASLVASC GGLGSRSSGR DCSVDLKLGG SGDFRSPASL GSQPTMSMAV ASSGPSKRAR APGNAGQIAS CSVDGCTSDL
101: SNSREYHRRH KVCEAHSKTP IVMVGGQEQR FCQQCSRFHL LVEFDEVKRS CRKRLDGHNR RRRKSQPESI NPARLFPNHQ GLNSRKCLVY PHVLPAPIQE
201: LNWAGIIQPE DMLYRNHLPL HVGDEQPFSG SFCSYRKGRQ LPFIQDDATA FGITTMAQST CLQPLLKNTP PSAESSSKIL CDRIQQVHSD CALSLLSSST
301: QNPGIALSQM LPAGRIPMHQ SLLSSLPYGN LGLHSMGMVF ACGADTDLHC QSVFHVPEGS SEGVSQTFPF CWQ
101: SNSREYHRRH KVCEAHSKTP IVMVGGQEQR FCQQCSRFHL LVEFDEVKRS CRKRLDGHNR RRRKSQPESI NPARLFPNHQ GLNSRKCLVY PHVLPAPIQE
201: LNWAGIIQPE DMLYRNHLPL HVGDEQPFSG SFCSYRKGRQ LPFIQDDATA FGITTMAQST CLQPLLKNTP PSAESSSKIL CDRIQQVHSD CALSLLSSST
301: QNPGIALSQM LPAGRIPMHQ SLLSSLPYGN LGLHSMGMVF ACGADTDLHC QSVFHVPEGS SEGVSQTFPF CWQ
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.