Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 47.55 | 56.7 |
| HORVU2Hr1G097580.1 | Barley | nucleus | 27.67 | 45.93 |
| HORVU2Hr1G097610.1 | Barley | nucleus | 26.8 | 45.81 |
| KRG88952 | Soybean | nucleus | 27.09 | 41.96 |
| TraesCS2A01G413900.1 | Wheat | nucleus | 40.35 | 40.11 |
| TraesCS2B01G432700.1 | Wheat | nucleus | 40.63 | 39.94 |
| TraesCS2D01G410700.1 | Wheat | nucleus | 40.63 | 39.72 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 16.14 | 36.6 |
| Os04t0551500-01 | Rice | nucleus | 37.75 | 36.39 |
| Zm00001d026175_P001 | Maize | nucleus | 40.35 | 35.09 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 18.73 | 34.76 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 18.73 | 34.76 |
| EES11232 | Sorghum | nucleus | 41.21 | 34.21 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 19.6 | 31.63 |
| KRH75287 | Soybean | nucleus | 31.12 | 31.4 |
| KRH48746 | Soybean | nucleus | 28.53 | 28.95 |
| VIT_15s0021g02290.t01 | Wine grape | nucleus | 33.14 | 28.82 |
| KRH66613 | Soybean | nucleus | 28.24 | 28.66 |
| GSMUA_Achr10P... | Banana | nucleus | 18.44 | 28.07 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 19.02 | 25.88 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 20.75 | 25.26 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 19.31 | 24.45 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 22.48 | 24.45 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 23.63 | 23.84 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 23.63 | 23.7 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 24.21 | 23.53 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 18.16 | 23.16 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.34 | 23.14 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 22.19 | 22.58 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.19 | 21.81 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 23.34 | 21.72 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 22.77 | 21.41 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 21.04 | 21.28 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 23.34 | 21.2 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 23.34 | 20.88 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 22.19 | 20.87 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 23.63 | 20.87 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 19.02 | 20.75 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.9 | 20.43 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 21.04 | 20.28 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 20.17 | 20.23 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 20.17 | 19.77 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 19.6 | 19.43 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 18.16 | 19.21 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 22.77 | 19.13 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 22.48 | 18.98 |
| GSMUA_Achr11P... | Banana | nucleus | 22.48 | 18.8 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 22.19 | 18.51 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 22.77 | 18.24 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 23.63 | 17.48 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 22.77 | 17.25 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 21.61 | 17.12 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 21.9 | 16.74 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 21.61 | 16.16 |
| GSMUA_Achr10P... | Banana | nucleus | 23.05 | 15.87 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 11.24 | 15.85 |
| GSMUA_Achr10P... | Banana | nucleus | 20.46 | 14.58 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 21.04 | 13.85 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr4G26940_001 |
| EnsemblPlants:GSMUA_Achr4P26940_001 | EnsemblPlants:GSMUA_Achr4T26940_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0SSF6 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF15 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI000294BDF0 | SEG:seg | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G26940_001]
Coordinates
chr4:+:25972671..25974057
Molecular Weight (calculated)
38177.2 Da
IEP (calculated)
8.767
GRAVY (calculated)
-0.409
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGGVAGRS GVLSWDFWKL RNWASSHSAS SSYSTAQPNA DAAAASFSST VAACFPCSDR EMMAGGNRDQ RALQYHHHHL TCLKLGKRQY YVEESGAAGA
101: AMKRERPAAA VPRCQVDGCG KVLADEKEYH KRHKVCELHS KAPKVVVRGV EQRFCQQCSR FHVVAEFDDS KRSCRRRLAG HNERRRKNST DPIARNPFLG
201: TTAQPYHLSC CLFAMTGDII PCISTSPGCA LSLLSSKVSP WISSSEFSSR SSAALNELIA ENRAAGLARR LLANRGGWHP VVSAEQPLFW PCPHHQASIS
301: QTQVRLDDGW IRLQDAGDRV MLDLMNAQLL LWDAAGEERV TGGRGVL
101: AMKRERPAAA VPRCQVDGCG KVLADEKEYH KRHKVCELHS KAPKVVVRGV EQRFCQQCSR FHVVAEFDDS KRSCRRRLAG HNERRRKNST DPIARNPFLG
201: TTAQPYHLSC CLFAMTGDII PCISTSPGCA LSLLSSKVSP WISSSEFSSR SSAALNELIA ENRAAGLARR LLANRGGWHP VVSAEQPLFW PCPHHQASIS
301: QTQVRLDDGW IRLQDAGDRV MLDLMNAQLL LWDAAGEERV TGGRGVL
001: MDCNMVSSFP WDWENLIMSN QSKTENEKKQ QSTEWEFEKG EGIESIVPDF LGFEKVSSGS ATSFWHTAVS KSSQSTSINS SSPEDKRCNL ASQSSPGDSS
101: SNIDFLQVKP STALEVPIAS AESDLCLKLG KRTYSEEFWG RNNNDLSAVS MNLLTPSVVA RKKTKSCGQS MQVPRCQIDG CELDLSSSKD YHRKHRVCET
201: HSKCPKVVVS GLERRFCQQC SRFHAVSEFD EKKRSCRKRL SHHNARRRKP QGVFPLNSER VFDRRQHTSM LWNGLSLNTR SEEKYTWGTT YETKPTQMES
301: GFTLSFQRGN GSEDQLFTGS TLSFSAFQTS GGFSAGKSNI QLPDKG
101: SNIDFLQVKP STALEVPIAS AESDLCLKLG KRTYSEEFWG RNNNDLSAVS MNLLTPSVVA RKKTKSCGQS MQVPRCQIDG CELDLSSSKD YHRKHRVCET
201: HSKCPKVVVS GLERRFCQQC SRFHAVSEFD EKKRSCRKRL SHHNARRRKP QGVFPLNSER VFDRRQHTSM LWNGLSLNTR SEEKYTWGTT YETKPTQMES
301: GFTLSFQRGN GSEDQLFTGS TLSFSAFQTS GGFSAGKSNI QLPDKG
Arabidopsis Description
SPL10Squamosa promoter-binding-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9L0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.