Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11232 | Sorghum | nucleus | 72.43 | 69.14 |
| HORVU2Hr1G097580.1 | Barley | nucleus | 31.83 | 60.77 |
| HORVU2Hr1G097610.1 | Barley | nucleus | 30.58 | 60.1 |
| Os04t0551500-01 | Rice | nucleus | 51.63 | 57.22 |
| TraesCS2A01G413900.1 | Wheat | nucleus | 48.87 | 55.87 |
| TraesCS2B01G432700.1 | Wheat | nucleus | 48.87 | 55.24 |
| TraesCS2D01G410700.1 | Wheat | nucleus | 49.12 | 55.21 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 33.33 | 45.7 |
| KRG88952 | Soybean | nucleus | 24.06 | 42.86 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 35.09 | 40.35 |
| KRH75287 | Soybean | nucleus | 26.57 | 30.81 |
| KRH66613 | Soybean | nucleus | 25.81 | 30.12 |
| VIT_15s0021g02290.t01 | Wine grape | nucleus | 30.08 | 30.08 |
| KRH48746 | Soybean | nucleus | 25.31 | 29.53 |
| Zm00001d021573_P001 | Maize | mitochondrion | 15.04 | 29.13 |
| Zm00001d006451_P001 | Maize | mitochondrion | 17.54 | 27.56 |
| Zm00001d053775_P001 | Maize | nucleus | 21.3 | 25.68 |
| Zm00001d015410_P002 | Maize | nucleus | 20.55 | 24.7 |
| Zm00001d020941_P001 | Maize | nucleus | 22.31 | 23.55 |
| Zm00001d012015_P001 | Maize | nucleus | 21.8 | 23.2 |
| Zm00001d006091_P001 | Maize | nucleus | 23.56 | 22.22 |
| Zm00001d006028_P001 | Maize | nucleus | 20.8 | 21.67 |
| Zm00001d031451_P001 | Maize | nucleus | 21.8 | 21.59 |
| Zm00001d052890_P001 | Maize | nucleus | 21.8 | 21.32 |
| Zm00001d042319_P001 | Maize | nucleus | 21.8 | 21.27 |
| Zm00001d049822_P001 | Maize | nucleus | 22.31 | 20.6 |
| Zm00001d049824_P002 | Maize | nucleus | 22.06 | 20.23 |
| Zm00001d021056_P001 | Maize | nucleus | 23.31 | 20.0 |
| Zm00001d002005_P001 | Maize | nucleus | 19.3 | 19.3 |
| Zm00001d026491_P001 | Maize | nucleus | 19.05 | 19.19 |
| Zm00001d036692_P001 | Maize | nucleus | 19.8 | 18.2 |
| Zm00001d046906_P001 | Maize | nucleus | 18.8 | 17.69 |
| Zm00001d015451_P001 | Maize | nucleus | 19.05 | 17.23 |
| Zm00001d014698_P001 | Maize | nucleus | 18.55 | 16.86 |
| Zm00001d053756_P001 | Maize | nucleus | 17.04 | 16.75 |
| Zm00001d053890_P003 | Maize | nucleus | 20.05 | 16.6 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 22.06 | 16.57 |
Protein Annotations
| EntrezGene:100279436 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | UniProt:A0A1D6JD63 | ProteinID:AQK45766.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | PFAM:PF03110 | PFscan:PS51141 |
| PANTHER:PTHR31251 | PANTHER:PTHR31251:SF15 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI00073A4D6B |
| EnsemblPlantsGene:Zm00001d026175 | EnsemblPlants:Zm00001d026175_P001 | EnsemblPlants:Zm00001d026175_T001 | SEG:seg | : | : |
Description
SBP-transcription factor 21Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
Coordinates
chr10:-:140333912..140336785
Molecular Weight (calculated)
41288.1 Da
IEP (calculated)
9.089
GRAVY (calculated)
-0.442
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGNGGAGGG SGSAAPPWDL AMHWAPAVVS SYPPQPLELQ QQELTCLKLG KRPACCWAGA PGNQAAQVHG NGGAGGAAAE GKRKDKAPAA AAVTRCQVEG
101: CHLSLADAKE YHRRHKVCEA HSKAPRVVVL GAEQRFCQQC SRFHAISEFD DAKRSCRRRL AGHNERRRKS NASEAMARGV AHPHGVTAFG HGGFLPSRGL
201: VPAGSSPAAA GALSLLSSAR GSVAGASGPW LVTAAREDIP ARSSAALDDL IAENRAAALL ARQYFVSDRS PAPRRDFVAS STAGCSLQQQ QHPPDHDHTA
301: GWHPHPHPYS GGGGGSCGGR YQYHHVAPPS AWHATTLDLM QPTASTTAAP ATAGAALWPA VPERAGARSS RSRSETKDGD ASGCSGLDAW APTGGARVL
101: CHLSLADAKE YHRRHKVCEA HSKAPRVVVL GAEQRFCQQC SRFHAISEFD DAKRSCRRRL AGHNERRRKS NASEAMARGV AHPHGVTAFG HGGFLPSRGL
201: VPAGSSPAAA GALSLLSSAR GSVAGASGPW LVTAAREDIP ARSSAALDDL IAENRAAALL ARQYFVSDRS PAPRRDFVAS STAGCSLQQQ QHPPDHDHTA
301: GWHPHPHPYS GGGGGSCGGR YQYHHVAPPS AWHATTLDLM QPTASTTAAP ATAGAALWPA VPERAGARSS RSRSETKDGD ASGCSGLDAW APTGGARVL
001: MDCNMVSSFP WDWENLIMSN QSKTENEKKQ QSTEWEFEKG EGIESIVPDF LGFEKVSSGS ATSFWHTAVS KSSQSTSINS SSPEDKRCNL ASQSSPGDSS
101: SNIDFLQVKP STALEVPIAS AESDLCLKLG KRTYSEEFWG RNNNDLSAVS MNLLTPSVVA RKKTKSCGQS MQVPRCQIDG CELDLSSSKD YHRKHRVCET
201: HSKCPKVVVS GLERRFCQQC SRFHAVSEFD EKKRSCRKRL SHHNARRRKP QGVFPLNSER VFDRRQHTSM LWNGLSLNTR SEEKYTWGTT YETKPTQMES
301: GFTLSFQRGN GSEDQLFTGS TLSFSAFQTS GGFSAGKSNI QLPDKG
101: SNIDFLQVKP STALEVPIAS AESDLCLKLG KRTYSEEFWG RNNNDLSAVS MNLLTPSVVA RKKTKSCGQS MQVPRCQIDG CELDLSSSKD YHRKHRVCET
201: HSKCPKVVVS GLERRFCQQC SRFHAVSEFD EKKRSCRKRL SHHNARRRKP QGVFPLNSER VFDRRQHTSM LWNGLSLNTR SEEKYTWGTT YETKPTQMES
301: GFTLSFQRGN GSEDQLFTGS TLSFSAFQTS GGFSAGKSNI QLPDKG
Arabidopsis Description
SPL10Squamosa promoter-binding-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9L0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.