Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
27297264
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36284 | Sorghum | nucleus | 83.5 | 78.9 |
| KRH10909 | Soybean | nucleus | 29.13 | 43.48 |
| KRH21401 | Soybean | nucleus | 28.16 | 42.03 |
| VIT_10s0003g00050.t01 | Wine grape | nucleus | 28.16 | 41.43 |
| AT2G33810.1 | Thale cress | nucleus | 26.21 | 41.22 |
| CDY57212 | Canola | nucleus | 28.16 | 41.13 |
| CDY37684 | Canola | nucleus | 28.16 | 41.13 |
| Bra021880.1-P | Field mustard | nucleus | 27.67 | 40.43 |
| KRH50085 | Soybean | nucleus | 28.64 | 40.41 |
| Solyc07g062980.2.1 | Tomato | nucleus | 25.73 | 40.15 |
| KRH20415 | Soybean | nucleus | 27.67 | 40.14 |
| PGSC0003DMT400085174 | Potato | nucleus | 25.73 | 39.85 |
| Bra005470.1-P | Field mustard | nucleus | 26.7 | 38.73 |
| CDY27935 | Canola | nucleus | 27.18 | 38.1 |
| CDY17204 | Canola | nucleus | 25.73 | 37.32 |
| CDY50515 | Canola | nucleus | 26.7 | 35.03 |
| TraesCS2D01G232800.1 | Wheat | nucleus | 32.52 | 34.9 |
| TraesCS2A01G232400.1 | Wheat | nucleus | 32.52 | 34.9 |
| TraesCS2B01G250900.1 | Wheat | nucleus | 32.52 | 34.9 |
| VIT_12s0028g03350.t01 | Wine grape | nucleus | 28.16 | 34.32 |
| CDY24113 | Canola | nucleus | 26.7 | 34.16 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 30.58 | 33.69 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 29.61 | 32.62 |
| AT1G53160.1 | Thale cress | nucleus | 27.18 | 32.18 |
| KRH22367 | Soybean | nucleus | 24.27 | 31.65 |
| CDY25876 | Canola | nucleus | 26.7 | 31.25 |
| KRG88838 | Soybean | nucleus | 28.64 | 31.05 |
| KRH55227 | Soybean | nucleus | 27.67 | 30.81 |
| CDX98540 | Canola | nucleus | 26.7 | 30.73 |
| CDX97645 | Canola | nucleus | 26.7 | 30.73 |
| Bra027265.1-P | Field mustard | nucleus | 26.7 | 30.73 |
| CDY20128 | Canola | nucleus | 26.21 | 30.68 |
| Bra021094.1-P | Field mustard | nucleus | 26.21 | 30.68 |
| Bra039656.1-P | Field mustard | nucleus | 26.7 | 30.56 |
| KRH22053 | Soybean | nucleus | 27.67 | 30.48 |
| KRH27270 | Soybean | nucleus | 27.67 | 30.48 |
| CDY61210 | Canola | nucleus | 26.21 | 30.17 |
| Bra038101.1-P | Field mustard | nucleus | 26.7 | 30.05 |
| AT3G15270.1 | Thale cress | nucleus | 26.21 | 29.83 |
| Os07t0505200-01 | Rice | nucleus | 31.07 | 29.63 |
| CDY32310 | Canola | nucleus | 25.24 | 29.55 |
| HORVU2Hr1G048280.2 | Barley | plastid | 27.67 | 29.23 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 29.61 | 28.37 |
| CDX79544 | Canola | nucleus | 25.73 | 28.34 |
| Zm00001d006451_P001 | Maize | mitochondrion | 34.47 | 27.95 |
| VIT_19s0014g02350.t01 | Wine grape | nucleus | 27.67 | 27.94 |
| Zm00001d015410_P002 | Maize | nucleus | 26.7 | 16.57 |
| Zm00001d053775_P001 | Maize | nucleus | 25.73 | 16.01 |
| Zm00001d020941_P001 | Maize | nucleus | 28.64 | 15.61 |
| Zm00001d002005_P001 | Maize | nucleus | 29.61 | 15.29 |
| Zm00001d012015_P001 | Maize | nucleus | 27.67 | 15.2 |
| Zm00001d026175_P001 | Maize | nucleus | 29.13 | 15.04 |
| Zm00001d052890_P001 | Maize | nucleus | 29.61 | 14.95 |
| Zm00001d031451_P001 | Maize | nucleus | 29.13 | 14.89 |
| Zm00001d026491_P001 | Maize | nucleus | 28.16 | 14.65 |
| Zm00001d006028_P001 | Maize | nucleus | 26.7 | 14.36 |
| Zm00001d006091_P001 | Maize | nucleus | 29.13 | 14.18 |
| Zm00001d036692_P001 | Maize | nucleus | 29.61 | 14.06 |
| Zm00001d042319_P001 | Maize | nucleus | 27.67 | 13.94 |
| Zm00001d046906_P001 | Maize | nucleus | 28.64 | 13.92 |
| Zm00001d053756_P001 | Maize | nucleus | 27.18 | 13.79 |
| Zm00001d021056_P001 | Maize | nucleus | 30.1 | 13.33 |
| Zm00001d049824_P002 | Maize | nucleus | 27.67 | 13.1 |
| Zm00001d015451_P001 | Maize | nucleus | 27.67 | 12.93 |
| Zm00001d049822_P001 | Maize | nucleus | 26.7 | 12.73 |
| Zm00001d014698_P001 | Maize | nucleus | 25.24 | 11.85 |
| Zm00001d053890_P003 | Maize | nucleus | 25.24 | 10.79 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 24.76 | 9.6 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | UniProt:A0A1D6ICF4 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 |
| InterPro:IPR004333 | InterPro:IPR036893 | ProteinID:ONM57546.1 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 |
| PANTHER:PTHR31251:SF60 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI000221C133 | EnsemblPlantsGene:Zm00001d021573 |
| EnsemblPlants:Zm00001d021573_P001 | EnsemblPlants:Zm00001d021573_T001 | SEG:seg | : | : | : |
Description
SBP-transcription factor 29SBP domain containing protein
Coordinates
chr7:-:156465329..156466981
Molecular Weight (calculated)
21041.4 Da
IEP (calculated)
10.070
GRAVY (calculated)
-0.579
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDSSSSAGT GGMAPSSSAA ASIAALAAAA ASGDGSDDSG AANNNGALPL PLPPPHGVED NNSPAELAGA GGTSRAVARR VAAAGASPAA AARRGAAVNA
101: QAAGGAGPSC QVERCSADMG VEKRYNRRHK VCDAHRKASV VLLAGLRQRF CQQCSRFHEL SHFDDTKRSC RLRLAGHNER RRRNPAEAQD QHGGRGDPGS
201: HHLQIR
101: QAAGGAGPSC QVERCSADMG VEKRYNRRHK VCDAHRKASV VLLAGLRQRF CQQCSRFHEL SHFDDTKRSC RLRLAGHNER RRRNPAEAQD QHGGRGDPGS
201: HHLQIR
001: MEGKRSQGQG YMKKKSYLVE EDMETDTDEE EEVGRDRVRG SRGSINRGGS LRLCQVDRCT ADMKEAKLYH RRHKVCEVHA KASSVFLSGL NQRFCQQCSR
101: FHDLQEFDEA KRSCRRRLAG HNERRRKSSG ESTYGEGSGR RGINGQVVMQ NQERSRIRVR SVTYPKAQGN Y
101: FHDLQEFDEA KRSCRRRLAG HNERRRKSSG ESTYGEGSGR RGINGQVVMQ NQERSRIRVR SVTYPKAQGN Y
Arabidopsis Description
SPL4Squamosa promoter-binding-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7A9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.