Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400085174 | Potato | nucleus | 89.39 | 88.72 |
| Solyc10g009080.2.1 | Tomato | nucleus | 40.15 | 39.26 |
| Solyc02g077920.2.1 | Tomato | nucleus | 37.12 | 36.03 |
| Solyc07g053810.2.1 | Tomato | nucleus | 37.88 | 34.01 |
| EER97257 | Sorghum | nucleus | 42.42 | 26.05 |
| Zm00001d021573_P001 | Maize | mitochondrion | 40.15 | 25.73 |
| Os07t0505200-01 | Rice | nucleus | 40.15 | 24.54 |
| KXG36284 | Sorghum | nucleus | 40.15 | 24.31 |
| Zm00001d006451_P001 | Maize | mitochondrion | 43.18 | 22.44 |
| Solyc03g114850.2.1 | Tomato | nucleus | 34.85 | 17.36 |
| Solyc01g090730.2.1 | Tomato | nucleus | 37.12 | 16.39 |
| Solyc10g018780.1.1 | Tomato | nucleus | 36.36 | 16.38 |
| Solyc05g015840.2.1 | Tomato | nucleus | 37.12 | 15.71 |
| Solyc10g078700.1.1 | Tomato | nucleus | 41.67 | 14.78 |
| Solyc04g045560.2.1 | Tomato | nucleus | 33.33 | 12.57 |
| Solyc12g038520.1.1 | Tomato | nucleus | 37.12 | 10.96 |
| Solyc05g015510.2.1 | Tomato | nucleus | 35.61 | 10.15 |
| Solyc05g012040.2.1 | Tomato | nucleus | 40.15 | 9.5 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 |
| InterPro:IPR036893 | UniProt:K4CGY1 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF62 |
| InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | EnsemblPlantsGene:Solyc07g062980.2 | EnsemblPlants:Solyc07g062980.2.1 | UniParc:UPI000276BA55 |
Description
No Description!
Coordinates
chr7:-:65599440..65600609
Molecular Weight (calculated)
15040.2 Da
IEP (calculated)
9.137
GRAVY (calculated)
-0.704
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MANNDAGEGV VMQVMKHYCQ VETCEANLDG AKKYHKRHKV CQVHAKAPIV LLAGLKQRFC QQCSKFHELS EFDGTKKSCR LRLDGHNKRR RKTPLPIELE
101: DNQCRLINGE ARPHMDMTLS SRNTIYTADI SG
101: DNQCRLINGE ARPHMDMTLS SRNTIYTADI SG
001: MSMRRSKAEG KRSLRELSEE EEEEEETEDE DTFEEEEALE KKQKGKATSS SGVCQVESCT ADMSKAKQYH KRHKVCQFHA KAPHVRISGL HQRFCQQCSR
101: FHALSEFDEA KRSCRRRLAG HNERRRKSTT D
101: FHALSEFDEA KRSCRRRLAG HNERRRKSTT D
Arabidopsis Description
SPL3Squamosa promoter-binding-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P93015]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.