Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400068752 | Potato | nucleus | 76.86 | 69.87 |
| Solyc05g015510.2.1 | Tomato | nucleus | 52.29 | 39.52 |
| Solyc02g077920.2.1 | Tomato | nucleus | 14.0 | 36.03 |
| Solyc10g009080.2.1 | Tomato | nucleus | 13.43 | 34.81 |
| Solyc07g053810.2.1 | Tomato | nucleus | 14.57 | 34.69 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 34.0 | 34.0 |
| Solyc07g062980.2.1 | Tomato | nucleus | 12.57 | 33.33 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 32.86 | 33.24 |
| Os02t0174100-02 | Rice | nucleus | 22.86 | 31.87 |
| VIT_01s0010g03710.t01 | Wine grape | nucleus | 42.29 | 31.03 |
| Os02t0139400-01 | Rice | nucleus | 24.29 | 30.14 |
| TraesCS6B01G183400.1 | Wheat | nucleus | 28.0 | 29.97 |
| TraesCS6A01G155300.1 | Wheat | nucleus | 28.0 | 29.88 |
| HORVU6Hr1G031450.6 | Barley | nucleus | 27.71 | 29.75 |
| Bra027478.1-P | Field mustard | nucleus | 33.14 | 29.74 |
| CDY32959 | Canola | nucleus | 33.14 | 29.74 |
| TraesCS6D01G145200.1 | Wheat | nucleus | 27.43 | 29.54 |
| CDY43604 | Canola | nucleus | 32.29 | 29.35 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 34.86 | 29.33 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 38.29 | 29.26 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 38.57 | 28.78 |
| EES04609 | Sorghum | nucleus | 27.71 | 28.78 |
| Zm00001d053775_P001 | Maize | nucleus | 27.14 | 28.7 |
| Zm00001d015410_P002 | Maize | nucleus | 27.14 | 28.61 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 35.14 | 28.08 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 36.0 | 27.75 |
| AT5G43270.1 | Thale cress | nucleus | 32.86 | 27.45 |
| Bra033671.1-P | Field mustard | nucleus | 28.29 | 27.35 |
| OQU77017 | Sorghum | nucleus | 34.0 | 27.05 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 35.71 | 26.94 |
| TraesCS6D01G098500.1 | Wheat | nucleus | 35.71 | 26.43 |
| TraesCS6B01G138400.1 | Wheat | nucleus | 35.71 | 26.43 |
| GSMUA_Achr10P... | Banana | nucleus | 38.0 | 26.39 |
| TraesCS6A01G110100.2 | Wheat | nucleus | 35.71 | 26.32 |
| Os06t0663500-00 | Rice | nucleus | 25.43 | 25.95 |
| EES04495 | Sorghum | nucleus | 35.43 | 25.83 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 31.43 | 25.4 |
| Zm00001d014698_P001 | Maize | nucleus | 31.71 | 25.28 |
| HORVU6Hr1G019700.3 | Barley | nucleus | 36.0 | 24.85 |
| Os06t0703500-02 | Rice | nucleus | 33.14 | 24.42 |
| Solyc05g015840.2.1 | Tomato | nucleus | 21.71 | 24.36 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 35.71 | 23.72 |
| GSMUA_Achr10P... | Banana | nucleus | 32.86 | 23.61 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 35.71 | 23.54 |
| Zm00001d053890_P003 | Maize | nucleus | 31.71 | 23.03 |
| CDY22356 | Canola | nucleus | 34.0 | 22.93 |
| CDY47812 | Canola | nucleus | 32.57 | 22.09 |
| Solyc10g078700.1.1 | Tomato | nucleus | 21.14 | 19.89 |
| Solyc10g018780.1.1 | Tomato | nucleus | 16.29 | 19.45 |
| Solyc03g114850.2.1 | Tomato | nucleus | 14.57 | 19.25 |
| Solyc01g090730.2.1 | Tomato | nucleus | 16.29 | 19.06 |
| Solyc12g038520.1.1 | Tomato | nucleus | 18.86 | 14.77 |
| Solyc05g012040.2.1 | Tomato | nucleus | 20.57 | 12.9 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 |
| InterPro:IPR036893 | UniProt:K4BRI5 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF30 |
| InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | EnsemblPlantsGene:Solyc04g045560.2 | EnsemblPlants:Solyc04g045560.2.1 | UniParc:UPI000276641D |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:34041203..34046691
Molecular Weight (calculated)
39180.0 Da
IEP (calculated)
8.788
GRAVY (calculated)
-0.629
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGSGFDSPP VGVYEKNSNC TVEEGCTSSA APMMYGLGKR NNSSVELPLP SLSKKTKSST HNPLKPHCQV DSCNLDLSSA KQYHRKHRVC HIHSKCPKVI
101: ILGRHRRFCQ QCSRFHSLSD FDENKRSCRT RLSDHNARRR KPQFNSTSTR FSSLFYDNKQ SMNLVFNNAP LVHSKPTADS TWETSEVSKF TLTRGLTLKP
201: YKADSFNGQS LVGGFKLSGT TEMQTNASNL YSVSNDTKAE VFSQGVKETT FSLNMGVAPE LPRALSLLSN ENEFISIGHS KHVNQIIIPE QVTHAIPQSL
301: PFESSERWQA EQHLFNPHIH TLVANGHSGG SFQEIQLSKD PFDDSYMSMD
101: ILGRHRRFCQ QCSRFHSLSD FDENKRSCRT RLSDHNARRR KPQFNSTSTR FSSLFYDNKQ SMNLVFNNAP LVHSKPTADS TWETSEVSKF TLTRGLTLKP
201: YKADSFNGQS LVGGFKLSGT TEMQTNASNL YSVSNDTKAE VFSQGVKETT FSLNMGVAPE LPRALSLLSN ENEFISIGHS KHVNQIIIPE QVTHAIPQSL
301: PFESSERWQA EQHLFNPHIH TLVANGHSGG SFQEIQLSKD PFDDSYMSMD
001: MECNAKPPFQ WELENLISFG TSTAEVPRKL KPMEWEIDGF DCTSLYSSSF AYAGSSGSDI AHAFSKSSKS TSISSSSAEV RTHNFTSETG ESLPGEFAKG
101: IDTSPSLELS FGSGDPVLGL KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS AKDYHRKHRI CENHSKFPKV
201: VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH
301: NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH
401: RNGVGQFNEN YFSLNQFYN
101: IDTSPSLELS FGSGDPVLGL KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS AKDYHRKHRI CENHSKFPKV
201: VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH
301: NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH
401: RNGVGQFNEN YFSLNQFYN
Arabidopsis Description
SPL2Squamosa promoter-binding-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S840]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.