Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033671.1-P | Field mustard | nucleus | 69.75 | 100.0 |
| CDY47812 | Canola | nucleus | 93.26 | 93.8 |
| CDY32959 | Canola | nucleus | 64.55 | 85.9 |
| CDY43604 | Canola | nucleus | 62.81 | 84.68 |
| AT5G43270.1 | Thale cress | nucleus | 67.82 | 84.01 |
| Os02t0139400-01 | Rice | nucleus | 23.89 | 43.97 |
| VIT_01s0010g03710.t01 | Wine grape | nucleus | 38.54 | 41.93 |
| CDY17204 | Canola | nucleus | 10.79 | 39.44 |
| PGSC0003DMT400084734 | Potato | nucleus | 35.07 | 39.14 |
| Solyc05g015510.2.1 | Tomato | nucleus | 34.3 | 38.44 |
| CDY37684 | Canola | nucleus | 10.4 | 38.3 |
| CDY57212 | Canola | nucleus | 10.21 | 37.59 |
| CDY27935 | Canola | nucleus | 10.6 | 37.41 |
| CDY27612 | Canola | nucleus | 23.51 | 37.08 |
| CDY15713 | Canola | nucleus | 27.55 | 36.67 |
| CDY03913 | Canola | nucleus | 26.01 | 36.39 |
| CDY03914 | Canola | nucleus | 26.01 | 36.29 |
| CDY67700 | Canola | nucleus | 24.08 | 36.13 |
| CDX84927 | Canola | nucleus | 25.43 | 35.97 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 23.89 | 35.84 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 28.71 | 35.82 |
| CDY11816 | Canola | nucleus | 25.05 | 35.62 |
| CDY15712 | Canola | nucleus | 25.63 | 35.56 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 31.21 | 35.37 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 23.7 | 35.14 |
| CDY27611 | Canola | nucleus | 24.66 | 35.07 |
| Os02t0174100-02 | Rice | nucleus | 16.96 | 35.06 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 31.41 | 34.75 |
| CDX84928 | Canola | nucleus | 24.28 | 34.62 |
| PGSC0003DMT400068752 | Potato | nucleus | 25.63 | 34.55 |
| Solyc04g045560.2.1 | Tomato | nucleus | 22.93 | 34.0 |
| TraesCS6D01G145200.1 | Wheat | nucleus | 21.0 | 33.54 |
| TraesCS6A01G155300.1 | Wheat | nucleus | 21.19 | 33.54 |
| TraesCS6B01G183400.1 | Wheat | nucleus | 21.0 | 33.33 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 27.75 | 33.26 |
| CDY50515 | Canola | nucleus | 10.02 | 33.12 |
| GSMUA_Achr10P... | Banana | nucleus | 31.02 | 33.06 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 29.48 | 32.97 |
| HORVU6Hr1G031450.6 | Barley | nucleus | 20.62 | 32.82 |
| Zm00001d014698_P001 | Maize | nucleus | 27.55 | 32.57 |
| Zm00001d015410_P002 | Maize | nucleus | 20.81 | 32.53 |
| TraesCS6D01G098500.1 | Wheat | nucleus | 29.29 | 32.14 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 26.98 | 31.96 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 27.94 | 31.94 |
| TraesCS6B01G138400.1 | Wheat | nucleus | 29.09 | 31.92 |
| OQU77017 | Sorghum | nucleus | 26.98 | 31.82 |
| EES04609 | Sorghum | nucleus | 20.62 | 31.75 |
| GSMUA_Achr10P... | Banana | nucleus | 30.83 | 31.75 |
| Zm00001d053775_P001 | Maize | nucleus | 20.23 | 31.72 |
| TraesCS6A01G110100.2 | Wheat | nucleus | 28.9 | 31.58 |
| Os06t0703500-02 | Rice | nucleus | 28.52 | 31.16 |
| CDY24113 | Canola | nucleus | 9.63 | 31.06 |
| CDY25876 | Canola | nucleus | 10.4 | 30.68 |
| EES04495 | Sorghum | nucleus | 28.32 | 30.62 |
| CDX79544 | Canola | nucleus | 10.98 | 30.48 |
| HORVU6Hr1G019700.3 | Barley | nucleus | 29.48 | 30.18 |
| CDY20128 | Canola | nucleus | 9.83 | 28.98 |
| CDY32310 | Canola | nucleus | 9.83 | 28.98 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 29.09 | 28.65 |
| CDX97645 | Canola | nucleus | 9.83 | 28.49 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 29.09 | 28.44 |
| Zm00001d053890_P003 | Maize | nucleus | 26.01 | 28.01 |
| Os06t0663500-00 | Rice | nucleus | 18.5 | 27.99 |
| CDY61210 | Canola | nucleus | 9.63 | 27.93 |
| CDX98540 | Canola | nucleus | 9.63 | 27.93 |
| CDX98259 | Canola | nucleus | 16.57 | 26.46 |
| CDY61750 | Canola | nucleus | 15.41 | 25.97 |
| CDX95958 | Canola | nucleus | 14.64 | 25.42 |
| CDX67715 | Canola | nucleus | 15.22 | 25.0 |
| CDY50300 | Canola | nucleus | 15.41 | 24.39 |
| CDY45826 | Canola | nucleus | 15.99 | 24.34 |
| CDX79888 | Canola | nucleus | 17.15 | 24.18 |
| CDX96251 | Canola | nucleus | 15.22 | 24.09 |
| CDY53504 | Canola | nucleus | 16.96 | 23.78 |
| CDY06881 | Canola | nucleus | 16.57 | 23.69 |
| CDY69014 | Canola | nucleus | 14.45 | 23.51 |
| CDX84872 | Canola | nucleus | 15.41 | 23.46 |
| CDY47656 | Canola | nucleus | 14.64 | 23.46 |
| CDX71667 | Canola | nucleus | 16.18 | 23.4 |
| CDX90071 | Canola | nucleus | 14.07 | 23.4 |
| CDY14818 | Canola | nucleus | 16.38 | 23.16 |
| CDX81606 | Canola | nucleus | 14.64 | 22.82 |
| CDY34028 | Canola | nucleus | 15.22 | 22.7 |
| CDY15132 | Canola | nucleus | 9.83 | 21.89 |
| CDY38043 | Canola | nucleus | 13.49 | 20.9 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 0.58 | 5.17 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:A0A078GAD2 | UniProt:A0A078GAD2 | EnsemblPlants:CDY22356 | ProteinID:CDY22356 |
| ProteinID:CDY22356.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00018836001 | InterPro:IPR004333 |
| InterPro:IPR036893 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF30 | InterPro:SBP_dom |
| InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI0004EEAA8F | SEG:seg | : | : |
Description
BnaA06g36780DBnaA06g36780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAD2]
Coordinates
chrLK032130:+:296525..299935
Molecular Weight (calculated)
57608.4 Da
IEP (calculated)
8.385
GRAVY (calculated)
-0.540
Length
519 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRPKKVEAG ERQFDPSPSP NLVLRFAHIT CFLSLSLLFS SPTLVLLSKC SVLCQAKNGS FTPLTTRSFP NSLINRFWCF SVCMECNAKP SLQWEWDNLI
101: SFGTSSAEIP KKQRPMDWEN DGFDCTTFYS SSFATEAAYG GGSSGSDLAH AFSKSSKSTS ISSSSAEVRT YNFTSEAGES VPPGELGSSE EFAMGIDASP
201: SLELSFGSGD PVLGLKLGKR TYFEDFWEVE NAKGSALPVS LASSSASPVK KSKTLSQKLQ TPHCQVEGCN LDLSSAKDYH RKHRICENHS KFPKVVVSGV
301: ERRFCQQCSR FHCLSEFDEK KRSCRRRLSD HNARRRKPNP GRTYDGKQQM DFVWNRFALI HPRSEENFLW PNPKPVSSRG LLQEPAKTEM PNKLFTEHCG
401: FGLLDPKTKT TRAELFSKDL LEKVTISSSH MGASQDLDGA LSLLSNSTPW VSSNQPTRFS LNHHSTSNLQ PVVHGSVTQL SSVSSYWQPD PPAAEGSTAL
501: TRNGVGQFNE NYNLNQFYN
101: SFGTSSAEIP KKQRPMDWEN DGFDCTTFYS SSFATEAAYG GGSSGSDLAH AFSKSSKSTS ISSSSAEVRT YNFTSEAGES VPPGELGSSE EFAMGIDASP
201: SLELSFGSGD PVLGLKLGKR TYFEDFWEVE NAKGSALPVS LASSSASPVK KSKTLSQKLQ TPHCQVEGCN LDLSSAKDYH RKHRICENHS KFPKVVVSGV
301: ERRFCQQCSR FHCLSEFDEK KRSCRRRLSD HNARRRKPNP GRTYDGKQQM DFVWNRFALI HPRSEENFLW PNPKPVSSRG LLQEPAKTEM PNKLFTEHCG
401: FGLLDPKTKT TRAELFSKDL LEKVTISSSH MGASQDLDGA LSLLSNSTPW VSSNQPTRFS LNHHSTSNLQ PVVHGSVTQL SSVSSYWQPD PPAAEGSTAL
501: TRNGVGQFNE NYNLNQFYN
001: MECNAKPPFQ WELENLISFG TSTAEVPRKL KPMEWEIDGF DCTSLYSSSF AYAGSSGSDI AHAFSKSSKS TSISSSSAEV RTHNFTSETG ESLPGEFAKG
101: IDTSPSLELS FGSGDPVLGL KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS AKDYHRKHRI CENHSKFPKV
201: VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH
301: NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH
401: RNGVGQFNEN YFSLNQFYN
101: IDTSPSLELS FGSGDPVLGL KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS AKDYHRKHRI CENHSKFPKV
201: VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH
301: NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH
401: RNGVGQFNEN YFSLNQFYN
Arabidopsis Description
SPL2Squamosa promoter-binding-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S840]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.