Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027478.1-P | Field mustard | nucleus | 99.74 | 99.74 |
| CDY43604 | Canola | nucleus | 93.33 | 94.55 |
| CDY22356 | Canola | nucleus | 85.9 | 64.55 |
| CDY47812 | Canola | nucleus | 83.08 | 62.79 |
| Os02t0139400-01 | Rice | nucleus | 29.23 | 40.43 |
| VIT_01s0010g03710.t01 | Wine grape | nucleus | 46.15 | 37.74 |
| CDY17204 | Canola | nucleus | 13.59 | 37.32 |
| CDY37684 | Canola | nucleus | 13.08 | 36.17 |
| CDY27935 | Canola | nucleus | 13.59 | 36.05 |
| CDY27612 | Canola | nucleus | 30.0 | 35.56 |
| CDY57212 | Canola | nucleus | 12.82 | 35.46 |
| CDY15713 | Canola | nucleus | 35.38 | 35.38 |
| CDY03913 | Canola | nucleus | 33.59 | 35.31 |
| CDY15712 | Canola | nucleus | 33.85 | 35.29 |
| PGSC0003DMT400084734 | Potato | nucleus | 42.05 | 35.27 |
| CDY03914 | Canola | nucleus | 33.59 | 35.22 |
| Solyc05g015510.2.1 | Tomato | nucleus | 41.54 | 34.99 |
| CDY67700 | Canola | nucleus | 30.51 | 34.39 |
| CDX84927 | Canola | nucleus | 32.05 | 34.06 |
| CDY27611 | Canola | nucleus | 31.54 | 33.7 |
| CDY11816 | Canola | nucleus | 31.28 | 33.42 |
| CDX84928 | Canola | nucleus | 31.03 | 33.24 |
| Solyc04g045560.2.1 | Tomato | nucleus | 29.74 | 33.14 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 38.46 | 32.75 |
| PGSC0003DMT400068752 | Potato | nucleus | 32.31 | 32.73 |
| Os02t0174100-02 | Rice | nucleus | 21.03 | 32.67 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 28.97 | 32.66 |
| CDY50515 | Canola | nucleus | 13.08 | 32.48 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 35.38 | 31.87 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 33.85 | 31.73 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 27.95 | 31.14 |
| TraesCS6A01G155300.1 | Wheat | nucleus | 25.64 | 30.49 |
| TraesCS6D01G145200.1 | Wheat | nucleus | 25.38 | 30.46 |
| CDY24113 | Canola | nucleus | 12.56 | 30.43 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 35.38 | 30.4 |
| TraesCS6B01G183400.1 | Wheat | nucleus | 25.38 | 30.28 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 35.9 | 30.17 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 33.59 | 29.91 |
| Zm00001d015410_P002 | Maize | nucleus | 25.38 | 29.82 |
| HORVU6Hr1G031450.6 | Barley | nucleus | 24.87 | 29.75 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 35.64 | 29.64 |
| Zm00001d053775_P001 | Maize | nucleus | 25.13 | 29.61 |
| CDY25876 | Canola | nucleus | 13.33 | 29.55 |
| Os06t0703500-02 | Rice | nucleus | 35.9 | 29.47 |
| Zm00001d014698_P001 | Maize | nucleus | 33.08 | 29.39 |
| EES04609 | Sorghum | nucleus | 25.38 | 29.38 |
| OQU77017 | Sorghum | nucleus | 33.08 | 29.32 |
| TraesCS6D01G098500.1 | Wheat | nucleus | 35.38 | 29.18 |
| GSMUA_Achr10P... | Banana | nucleus | 37.44 | 28.97 |
| TraesCS6B01G138400.1 | Wheat | nucleus | 35.13 | 28.96 |
| CDX79544 | Canola | nucleus | 13.85 | 28.88 |
| GSMUA_Achr10P... | Banana | nucleus | 35.9 | 28.75 |
| TraesCS6A01G110100.2 | Wheat | nucleus | 34.87 | 28.63 |
| EES04495 | Sorghum | nucleus | 35.13 | 28.54 |
| CDX97645 | Canola | nucleus | 13.08 | 28.49 |
| CDY32310 | Canola | nucleus | 12.82 | 28.41 |
| CDY20128 | Canola | nucleus | 12.82 | 28.41 |
| CDX98540 | Canola | nucleus | 12.82 | 27.93 |
| CDY61210 | Canola | nucleus | 12.56 | 27.37 |
| HORVU6Hr1G019700.3 | Barley | nucleus | 34.87 | 26.82 |
| CDX98259 | Canola | nucleus | 22.31 | 26.77 |
| CDY61750 | Canola | nucleus | 21.03 | 26.62 |
| Os06t0663500-00 | Rice | nucleus | 23.33 | 26.53 |
| Zm00001d053890_P003 | Maize | nucleus | 32.05 | 25.93 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 34.87 | 25.81 |
| CDX67715 | Canola | nucleus | 20.77 | 25.63 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 34.62 | 25.42 |
| CDX95958 | Canola | nucleus | 19.23 | 25.08 |
| CDX79888 | Canola | nucleus | 22.82 | 24.18 |
| CDY47656 | Canola | nucleus | 20.0 | 24.07 |
| CDY45826 | Canola | nucleus | 21.03 | 24.05 |
| CDY53504 | Canola | nucleus | 22.56 | 23.78 |
| CDY50300 | Canola | nucleus | 19.74 | 23.48 |
| CDY06881 | Canola | nucleus | 21.79 | 23.42 |
| CDX90071 | Canola | nucleus | 18.72 | 23.4 |
| CDY69014 | Canola | nucleus | 18.97 | 23.2 |
| CDX96251 | Canola | nucleus | 19.49 | 23.17 |
| CDX84872 | Canola | nucleus | 20.26 | 23.17 |
| CDY14818 | Canola | nucleus | 21.54 | 22.89 |
| CDX81606 | Canola | nucleus | 18.97 | 22.22 |
| CDX71667 | Canola | nucleus | 20.26 | 22.01 |
| CDY15132 | Canola | nucleus | 13.08 | 21.89 |
| CDY34028 | Canola | nucleus | 19.49 | 21.84 |
| CDY38043 | Canola | nucleus | 17.95 | 20.9 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 0.51 | 3.45 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:A0A078H634 | UniProt:A0A078H634 | EnsemblPlants:CDY32959 | ProteinID:CDY32959 |
| ProteinID:CDY32959.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00053169001 | InterPro:IPR004333 |
| InterPro:IPR036893 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF30 | InterPro:SBP_dom |
| InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI0004EDD0E4 | SEG:seg | : | : |
Description
BnaA09g16340DBnaA09g16340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H634]
Coordinates
chrLK032303:+:336252..338537
Molecular Weight (calculated)
43667.8 Da
IEP (calculated)
8.271
GRAVY (calculated)
-0.713
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MECNAQCDWE NLISFGTSSA EIPRKLRPMD WETDEFDCSF PTAAYGSSSG LAHAFSKSSK STSISSSSPE ARTLNFTSEE LGSSEEFAKG INTSPSLELS
101: FGSSDPVLGL KLGKRTYFED FWEVENAARG SALPVSLVSS SASPVKKTKS VPQKVQTPRC QVEGCNLDLS SAKDYHRKHR ICENHSKFPK VVVSGVERRF
201: CQQCSRFHCL SEFDEKKRSC RRRLSDHNAR RRKPNPGGTY EGKQQMDFVW NRFALIHPRT EEKFLWPNPK PIPSRGLIQQ PAKTRSAELF SKEKVTISSS
301: MGASQDLDGA LSLLSNSTAW VPSDQPTRFS LDHHPTTNLQ PTAHRSVTHL STVSDYWQPD PPAVEGPTDL HRNGVGQFNE NYFSLNQFYN
101: FGSSDPVLGL KLGKRTYFED FWEVENAARG SALPVSLVSS SASPVKKTKS VPQKVQTPRC QVEGCNLDLS SAKDYHRKHR ICENHSKFPK VVVSGVERRF
201: CQQCSRFHCL SEFDEKKRSC RRRLSDHNAR RRKPNPGGTY EGKQQMDFVW NRFALIHPRT EEKFLWPNPK PIPSRGLIQQ PAKTRSAELF SKEKVTISSS
301: MGASQDLDGA LSLLSNSTAW VPSDQPTRFS LDHHPTTNLQ PTAHRSVTHL STVSDYWQPD PPAVEGPTDL HRNGVGQFNE NYFSLNQFYN
001: MECNAKPPFQ WELENLISFG TSTAEVPRKL KPMEWEIDGF DCTSLYSSSF AYAGSSGSDI AHAFSKSSKS TSISSSSAEV RTHNFTSETG ESLPGEFAKG
101: IDTSPSLELS FGSGDPVLGL KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS AKDYHRKHRI CENHSKFPKV
201: VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH
301: NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH
401: RNGVGQFNEN YFSLNQFYN
101: IDTSPSLELS FGSGDPVLGL KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS AKDYHRKHRI CENHSKFPKV
201: VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH
301: NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH
401: RNGVGQFNEN YFSLNQFYN
Arabidopsis Description
SPL2Squamosa promoter-binding-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S840]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.