Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400074976 | Potato | nucleus | 93.86 | 93.86 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 60.75 | 58.55 |
| Bra032662.1-P | Field mustard | nucleus | 30.38 | 56.33 |
| Solyc01g090730.2.1 | Tomato | nucleus | 55.97 | 54.85 |
| KRH66611 | Soybean | nucleus | 54.27 | 47.32 |
| Solyc02g077920.2.1 | Tomato | nucleus | 21.84 | 47.06 |
| KRH48747 | Soybean | nucleus | 53.92 | 46.75 |
| Solyc10g009080.2.1 | Tomato | nucleus | 21.16 | 45.93 |
| CDX90071 | Canola | nucleus | 48.12 | 45.19 |
| Bra033221.1-P | Field mustard | nucleus | 50.51 | 45.12 |
| KRH75288 | Soybean | nucleus | 43.34 | 44.25 |
| CDY15132 | Canola | nucleus | 34.13 | 42.92 |
| CDY38043 | Canola | nucleus | 48.46 | 42.39 |
| KRH07602 | Soybean | nucleus | 31.06 | 42.13 |
| AT1G02065.1 | Thale cress | nucleus | 47.44 | 41.74 |
| Solyc07g053810.2.1 | Tomato | nucleus | 19.8 | 39.46 |
| Solyc07g062980.2.1 | Tomato | nucleus | 16.38 | 36.36 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 32.42 | 29.87 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 32.76 | 29.27 |
| Solyc03g114850.2.1 | Tomato | nucleus | 24.57 | 27.17 |
| TraesCS7D01G482300.1 | Wheat | nucleus | 28.67 | 26.5 |
| TraesCS7D01G482400.1 | Wheat | nucleus | 30.72 | 23.2 |
| TraesCS7B01G402300.1 | Wheat | nucleus | 30.03 | 22.56 |
| TraesCS7D01G482500.1 | Wheat | nucleus | 31.74 | 22.36 |
| TraesCS7A01G494900.1 | Wheat | nucleus | 29.69 | 22.08 |
| TraesCS7B01G402200.1 | Wheat | nucleus | 31.4 | 22.06 |
| TraesCS7A01G495100.1 | Wheat | nucleus | 31.4 | 21.96 |
| TraesCS7B01G402400.1 | Wheat | nucleus | 30.03 | 21.95 |
| TraesCS7A01G495000.1 | Wheat | nucleus | 30.38 | 21.92 |
| Zm00001d026491_P001 | Maize | nucleus | 28.67 | 21.21 |
| Zm00001d053756_P001 | Maize | nucleus | 29.35 | 21.18 |
| Os06t0659100-00 | Rice | nucleus | 30.72 | 21.13 |
| Zm00001d015451_P001 | Maize | nucleus | 31.74 | 21.09 |
| TraesCS7D01G482200.1 | Wheat | nucleus | 29.01 | 20.83 |
| Zm00001d002005_P001 | Maize | nucleus | 28.33 | 20.8 |
| Zm00001d046906_P001 | Maize | nucleus | 30.03 | 20.75 |
| Zm00001d036692_P001 | Maize | nucleus | 30.72 | 20.74 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 28.67 | 20.64 |
| TraesCS2B01G530400.1 | Wheat | nucleus | 28.67 | 20.59 |
| TraesCS6B01G180300.1 | Wheat | nucleus | 31.06 | 20.59 |
| TraesCS6D01G142100.1 | Wheat | nucleus | 31.74 | 20.58 |
| TraesCS7A01G494800.1 | Wheat | nucleus | 27.99 | 20.55 |
| TraesCS6A01G152000.1 | Wheat | nucleus | 31.4 | 20.54 |
| EES11579 | Sorghum | nucleus | 27.99 | 20.5 |
| EER88765 | Sorghum | nucleus | 31.06 | 20.5 |
| Os04t0656500-01 | Rice | nucleus | 29.01 | 20.43 |
| TraesCS2A01G502300.1 | Wheat | nucleus | 28.67 | 20.39 |
| OQU84482 | Sorghum | nucleus | 30.38 | 20.0 |
| Solyc10g078700.1.1 | Tomato | nucleus | 25.26 | 19.89 |
| Solyc05g015840.2.1 | Tomato | nucleus | 20.48 | 19.23 |
| Os02t0177300-00 | Rice | nucleus | 30.72 | 19.23 |
| HORVU7Hr1G110980.3 | Barley | nucleus, plastid | 29.01 | 18.93 |
| HORVU6Hr1G030490.2 | Barley | nucleus, plastid | 31.06 | 18.53 |
| Solyc04g045560.2.1 | Tomato | nucleus | 19.45 | 16.29 |
| Solyc12g038520.1.1 | Tomato | nucleus | 24.23 | 15.88 |
| Solyc05g015510.2.1 | Tomato | nucleus | 24.57 | 15.55 |
| Solyc05g012040.2.1 | Tomato | nucleus | 26.28 | 13.8 |
| HORVU2Hr1G111620.1 | Barley | cytosol, nucleus | 1.37 | 6.25 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 |
| InterPro:IPR036893 | UniProt:K4CYZ9 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF4 |
| InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | EnsemblPlantsGene:Solyc10g018780.1 | EnsemblPlants:Solyc10g018780.1.1 | UniParc:UPI000276C995 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:10245278..10246430
Molecular Weight (calculated)
33430.4 Da
IEP (calculated)
8.407
GRAVY (calculated)
-1.043
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDYNWGEQS SVMLSNDEQN QENEQNREFF DPYGPNTQTY TENPYPHQHF PNIQHQNHQF FHTQNNPTTL YDPRSYETCY TPHPHPQSSM LQQNSGFMVV
101: PKSEPNQFVG NGSGIDFGSS SSSRIGLNLG GRTYFSSSED HDFVNRLYRR SRAVETAGSI MNTPRCQAEG CNADLTHAKH YHRRHKVCEF HSKASTVIAA
201: GITQRFCQQC SRFHLLSEFD NGKRSCRKRL ADHNRRRRKN QQANLENSNK DTTTNSPSDT LARSPADSGA HCSSVTVAIS PPRISLDVFR QRP
101: PKSEPNQFVG NGSGIDFGSS SSSRIGLNLG GRTYFSSSED HDFVNRLYRR SRAVETAGSI MNTPRCQAEG CNADLTHAKH YHRRHKVCEF HSKASTVIAA
201: GITQRFCQQC SRFHLLSEFD NGKRSCRKRL ADHNRRRRKN QQANLENSNK DTTTNSPSDT LARSPADSGA HCSSVTVAIS PPRISLDVFR QRP
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.