Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 40.92 | 52.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.46 | 52.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.1 | 50.42 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 46.25 | 48.6 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.16 | 48.57 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 42.62 | 47.19 |
| HORVU0Hr1G039170.6 | Barley | nucleus | 45.28 | 46.75 |
| TraesCS7D01G261500.1 | Wheat | nucleus | 46.0 | 45.89 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 16.95 | 45.75 |
| TraesCS7A01G260500.1 | Wheat | nucleus | 45.04 | 45.7 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 39.71 | 45.56 |
| TraesCS7B01G158500.1 | Wheat | nucleus | 45.04 | 45.48 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 41.89 | 45.29 |
| GSMUA_Achr11P... | Banana | nucleus | 45.04 | 44.82 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 39.47 | 44.17 |
| Zm00001d006091_P001 | Maize | nucleus | 44.31 | 43.26 |
| TraesCS5B01G286000.1 | Wheat | nucleus | 43.58 | 41.57 |
| TraesCS5D01G294400.1 | Wheat | nucleus | 43.34 | 41.44 |
| Zm00001d049822_P001 | Maize | nucleus | 43.34 | 41.44 |
| TraesCS5A01G286700.2 | Wheat | nucleus | 43.1 | 40.83 |
| Zm00001d021056_P001 | Maize | nucleus | 45.28 | 40.22 |
| EER97011 | Sorghum | nucleus | 44.79 | 39.87 |
| Zm00001d049824_P002 | Maize | nucleus | 41.89 | 39.77 |
| Os08t0531600-01 | Rice | nucleus | 43.58 | 39.56 |
| HORVU5Hr1G076380.9 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 37.29 | 39.29 |
| KXG25534 | Sorghum | nucleus | 43.1 | 39.04 |
| Os09t0507100-00 | Rice | nucleus | 43.83 | 38.35 |
| Zm00001d012015_P001 | Maize | nucleus | 31.96 | 35.2 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 31.96 | 34.92 |
| EES01979 | Sorghum | nucleus | 33.41 | 34.24 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 15.5 | 34.22 |
| Os01t0922600-01 | Rice | nucleus | 25.67 | 34.08 |
| KRH06918 | Soybean | nucleus | 29.3 | 33.15 |
| TraesCS3B01G468400.1 | Wheat | nucleus | 33.17 | 33.09 |
| KRG94562 | Soybean | nucleus | 29.06 | 32.88 |
| TraesCS3D01G425800.1 | Wheat | nucleus | 33.17 | 32.7 |
| TraesCS3A01G432500.1 | Wheat | nucleus | 32.69 | 32.53 |
| HORVU3Hr1G094730.2 | Barley | nucleus | 33.66 | 32.4 |
| Zm00001d042319_P001 | Maize | nucleus | 31.96 | 32.27 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 14.53 | 32.09 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 15.25 | 29.3 |
| GSMUA_Achr10P... | Banana | nucleus | 15.74 | 28.51 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 18.4 | 26.67 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 17.68 | 26.64 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 17.43 | 26.47 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 21.79 | 26.39 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 16.22 | 26.27 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 21.07 | 25.36 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 17.43 | 24.74 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 20.58 | 24.71 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 20.1 | 23.99 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 21.31 | 23.85 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 19.13 | 22.77 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 18.89 | 22.29 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 17.68 | 22.26 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 18.64 | 22.25 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 18.89 | 22.03 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 21.79 | 21.9 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 16.71 | 21.7 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 18.16 | 21.01 |
| TraesCS4D01G332700.1 | Wheat | nucleus | 11.14 | 21.0 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 19.61 | 20.88 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 22.03 | 20.78 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 22.52 | 20.48 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 11.86 | 19.92 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 20.82 | 19.86 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 21.55 | 19.43 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 21.55 | 19.18 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 18.4 | 18.27 |
| GSMUA_Achr10P... | Banana | nucleus | 21.07 | 17.86 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 19.85 | 17.48 |
| GSMUA_Achr10P... | Banana | nucleus | 20.82 | 17.06 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 19.61 | 15.37 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 0.48 | 3.45 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr5G25090_001 |
| EnsemblPlants:GSMUA_Achr5P25090_001 | EnsemblPlants:GSMUA_Achr5T25090_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0T1I4 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF33 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI00029486D1 | SEG:seg | : | : | : | : |
Description
Putative Squamosa promoter-binding-like protein 18 [Source:GMGC_GENE;Acc:GSMUA_Achr5G25090_001]
Coordinates
chr5:-:26222311..26227313
Molecular Weight (calculated)
45124.3 Da
IEP (calculated)
8.063
GRAVY (calculated)
-0.445
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWDSKIPLW DLADLGRDAD PSVGIGCGLG RRPSEVDCSV DLKLGGSGDF VPSHGWNDQP KVPTMAASSG ASKRLPRNPG NGSQKASCSV DGCKADLSGC
101: REYHRRHKVC EAHSKTPVVM VGGREQRFCQ QCSRFHLLVE FDEVKRSCRR RLEGHNRRRR KPQPDSINSG SLFANHQGAT FSSYPPIFPT ATPEPNWPGA
201: VKTEDTALYA HCLPSHGTNR NHNVLSTHSW SQEGRQFPFL QENKTTFSKI TLGIPVGQPH LRTFMPSGNS CSGGKIFSDG SSEPIDSDCA LSLLSAPTPS
301: INTGLGQMVQ IPAGHPHASS LHHCDDHAGI FLVSDANESE IHFPNVLHVG GEGSSVGTSQ SLPFYWHLVK IFKDKTVYID PLLSGFQHIV CHLMLLLCTS
401: QCFVRKRLPA TNS
101: REYHRRHKVC EAHSKTPVVM VGGREQRFCQ QCSRFHLLVE FDEVKRSCRR RLEGHNRRRR KPQPDSINSG SLFANHQGAT FSSYPPIFPT ATPEPNWPGA
201: VKTEDTALYA HCLPSHGTNR NHNVLSTHSW SQEGRQFPFL QENKTTFSKI TLGIPVGQPH LRTFMPSGNS CSGGKIFSDG SSEPIDSDCA LSLLSAPTPS
301: INTGLGQMVQ IPAGHPHASS LHHCDDHAGI FLVSDANESE IHFPNVLHVG GEGSSVGTSQ SLPFYWHLVK IFKDKTVYID PLLSGFQHIV CHLMLLLCTS
401: QCFVRKRLPA TNS
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.