Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P27660_001 | Banana | nucleus | 77.03 | 71.82 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 75.29 | 66.75 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 56.1 | 55.78 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 54.36 | 52.38 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 31.4 | 37.89 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 36.92 | 37.24 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 19.19 | 35.29 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 25.0 | 34.96 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 18.9 | 34.76 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 34.59 | 34.69 |
| PGSC0003DMT400029751 | Potato | nucleus | 37.21 | 34.41 |
| Solyc10g078700.1.1 | Tomato | nucleus | 36.92 | 34.14 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 37.5 | 34.04 |
| KRG95361 | Soybean | nucleus | 34.88 | 33.43 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 14.83 | 33.33 |
| KRH71914 | Soybean | nucleus, plastid | 34.59 | 33.24 |
| KRH67040 | Soybean | nucleus | 34.88 | 32.7 |
| KRH38141 | Soybean | nucleus, plastid | 35.17 | 32.44 |
| CDX79888 | Canola | nucleus | 34.3 | 32.07 |
| CDX98259 | Canola | nucleus | 30.23 | 32.0 |
| CDY06881 | Canola | nucleus | 33.72 | 31.96 |
| Bra016891.1-P | Field mustard | nucleus | 33.72 | 31.96 |
| CDY53504 | Canola | nucleus | 34.3 | 31.89 |
| CDY14818 | Canola | nucleus | 33.72 | 31.61 |
| AT2G42200.1 | Thale cress | nucleus | 34.01 | 31.2 |
| Bra004674.1-P | Field mustard | nucleus | 33.14 | 30.89 |
| CDY61750 | Canola | nucleus | 27.33 | 30.52 |
| Bra003305.1-P | Field mustard | nucleus | 27.62 | 30.06 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 18.6 | 29.77 |
| CDX67715 | Canola | nucleus | 27.03 | 29.43 |
| AT3G57920.1 | Thale cress | nucleus | 30.23 | 29.38 |
| CDY47656 | Canola | nucleus | 27.62 | 29.32 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 34.88 | 29.2 |
| Bra014599.1-P | Field mustard | nucleus | 25.0 | 28.48 |
| GSMUA_Achr10P... | Banana | nucleus | 18.6 | 28.07 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 20.35 | 27.45 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 22.38 | 26.46 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 23.84 | 25.79 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 20.35 | 25.74 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 20.06 | 25.18 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 22.97 | 24.09 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 24.13 | 23.71 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 23.84 | 23.7 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 23.84 | 23.63 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 23.26 | 22.6 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.97 | 22.57 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 24.13 | 22.25 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 23.84 | 22.22 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 20.35 | 21.94 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 26.45 | 21.88 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 24.42 | 21.37 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.8 | 21.25 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 23.26 | 20.94 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 28.2 | 20.91 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 27.62 | 20.74 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 24.71 | 20.58 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 21.51 | 20.56 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.51 | 19.89 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 25.0 | 19.86 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 26.16 | 19.19 |
| GSMUA_Achr10P... | Banana | nucleus | 27.33 | 18.65 |
| GSMUA_Achr11P... | Banana | nucleus | 22.38 | 18.55 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 22.67 | 17.81 |
| GSMUA_Achr10P... | Banana | nucleus | 25.0 | 17.66 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 27.03 | 17.65 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 23.26 | 17.62 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr8G25550_001 |
| EnsemblPlants:GSMUA_Achr8P25550_001 | EnsemblPlants:GSMUA_Achr8T25550_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0TTK8 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF67 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI000296BE5F | SEG:seg | : | : | : | : |
Description
Putative Squamosa promoter-binding-like protein 17 [Source:GMGC_GENE;Acc:GSMUA_Achr8G25550_001]
Coordinates
chr8:+:29386166..29392927
Molecular Weight (calculated)
36964.9 Da
IEP (calculated)
8.149
GRAVY (calculated)
-0.624
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSSLKASG ASSGSGDALH GLKFGQKIYF EDGGGGKGKG VAQGGQQQPP RCQVEGCNAD LTGAKAYYCR HKVCGMHSKA PKVIVAGLEQ RFCQQCSRFH
101: QLPEFDQGKR SCRRRLAGHN ERRRKPPPGP FGTRYGRIAS SFHEDPNRFR SFLVDFSYPN FSCAARDVWP TARTGDRMAN NEWRGVLDAP SHAAALHGTH
201: PCFQGPPVGA FCSPMELPPG ECLAGVSDSS CALSLLSTDP WSSNSAGNRS PVIPASSTFD GQPTTHSVIP SNYFNSSWGT RGHGARISSH EIQHEMGLAG
301: GTTNVSDAHF TGQVEFAPQE NGHCLDHGSD RAYDHSGPGM QWSL
101: QLPEFDQGKR SCRRRLAGHN ERRRKPPPGP FGTRYGRIAS SFHEDPNRFR SFLVDFSYPN FSCAARDVWP TARTGDRMAN NEWRGVLDAP SHAAALHGTH
201: PCFQGPPVGA FCSPMELPPG ECLAGVSDSS CALSLLSTDP WSSNSAGNRS PVIPASSTFD GQPTTHSVIP SNYFNSSWGT RGHGARISSH EIQHEMGLAG
301: GTTNVSDAHF TGQVEFAPQE NGHCLDHGSD RAYDHSGPGM QWSL
001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
Arabidopsis Description
SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.