Factsheet for TraesCS3B01G468400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G432500.1	Wheat	nucleus	96.14	95.9
TraesCS3D01G425800.1	Wheat	nucleus	96.38	95.23
HORVU3Hr1G094730.2	Barley	nucleus	93.24	89.98
Os01t0922600-01	Rice	nucleus	48.79	64.95
EES01979	Sorghum	nucleus	59.9	61.54
Zm00001d042319_P001	Maize	nucleus	58.94	59.66
Zm00001d012015_P001	Maize	nucleus	53.38	58.93
GSMUA_AchrUn_...	Banana	nucleus	30.92	36.26
GSMUA_AchrUn_...	Banana	nucleus	30.43	36.0
TraesCS7B01G158500.1	Wheat	nucleus	34.54	34.96
GSMUA_AchrUn_...	Banana	nucleus	31.16	34.68
GSMUA_Achr7P22940_001	Banana	nucleus, vacuole	26.57	34.48
TraesCS2B01G250900.1	Wheat	nucleus	15.7	33.85
GSMUA_Achr5P25090_001	Banana	nucleus	33.09	33.17
TraesCS5B01G286000.1	Wheat	nucleus	34.06	32.56
VIT_14s0068g01780.t01	Wine grape	nucleus	29.47	32.28
GSMUA_Achr4P16050_001	Banana	nucleus	27.78	31.94
KRH06918	Soybean	nucleus	25.85	29.32
KRG94562	Soybean	nucleus	25.36	28.77
GSMUA_Achr11P...	Banana	nucleus	28.74	28.67
TraesCS2B01G432700.1	Wheat	nucleus	22.22	26.06
TraesCS6B01G183400.1	Wheat	nucleus	20.53	25.99
TraesCS7B01G144900.1	Wheat	nucleus	21.26	22.8
TraesCS5B01G265600.2	Wheat	nucleus	21.01	21.97
TraesCS7B01G402300.1	Wheat	nucleus	20.05	21.28
TraesCS7B01G402200.1	Wheat	nucleus	21.01	20.86
TraesCS7B01G402400.1	Wheat	nucleus	20.05	20.7
TraesCS2B01G530400.1	Wheat	nucleus	20.05	20.34
TraesCS6B01G138400.1	Wheat	nucleus	20.29	17.76
TraesCS6B01G180300.1	Wheat	nucleus	18.84	17.65
CDX80286	Canola	cytosol, nucleus, plasma membrane	0.72	5.17

Protein Annotations

EnsemblPlants:TraesCS3B01G468400.1	EnsemblPlantsGene:TraesCS3B01G468400	Gene3D:4.10.1100.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:IPR004333
InterPro:IPR036893	InterPro:SBP_dom	InterPro:SBP_sf	PANTHER:PTHR31251	PANTHER:PTHR31251:SF63	PFAM:PF03110
PFscan:PS51141	SEG:seg	SUPFAM:SSF103612	MapMan:15.5.18	:	:

Description

No Description!

Coordinates

chr3B:+:713321256..713324546

Molecular Weight (calculated)

43483.6 Da

IEP (calculated)

8.790

GRAVY (calculated)

-0.518

Length

414 amino acids

Sequence
(BLAST)

001: MDSWEPKMPS WDLGTVVAPS SGGGGGGGAL DLKLGAPTSW RPVPAGAAAA VVSVQQQQPP SAAPAKRARA GQGQQTVPPC SVEGCTADLS RCREYHRRHK
101: VCEAHSKTPV VAVAGQQQRF CQQCSRFHLL GEFDEVKRSC RKRLDGHNRR RRKPQPDPLN PAGLFANHHG VTRFASYPQI FSPTSMAEPK WPGGIAVKTE
201: ADAFHEQYYS FSGAASLFHH GKPERKHFPF LTDGGGEATF GCQPPAFTIT PSSESSSNSS RHSNGKTTMF AHDGGPDHNC ALSLLSDNPA SAHIMVPAEA
301: HHLGGGGVTI QYGGGGGGGG KVARLSSNGD VSLTGLSYVS LGDKGAPMLH ASNRSQHAAA TAATAVATST AAAPAASQLQ QQYHGYYHHQ HQVSADQGSH
401: PDAGGMHALP FSSW

Best Arabidopsis Sequence Match ( AT5G50670.2 )
(BLAST)

001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE

Arabidopsis Description

SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.