Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G245200.2 | Wheat | nucleus | 95.85 | 96.1 |
| TraesCS7A01G246500.1 | Wheat | nucleus | 95.08 | 95.08 |
| Os09t0491532-01 | Rice | nucleus | 53.37 | 63.78 |
| Zm00001d020941_P001 | Maize | nucleus | 60.88 | 62.17 |
| EER99092 | Sorghum | nucleus | 61.4 | 61.08 |
| Os08t0509600-01 | Rice | nucleus | 64.51 | 59.71 |
| Zm00001d006028_P001 | Maize | nucleus | 57.51 | 57.96 |
| TraesCS5B01G265600.2 | Wheat | nucleus | 55.96 | 54.55 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 44.82 | 50.0 |
| TraesCS2B01G250900.1 | Wheat | nucleus | 18.13 | 36.46 |
| KRG95361 | Soybean | nucleus | 33.42 | 35.93 |
| KRH67040 | Soybean | nucleus | 32.9 | 34.6 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 33.16 | 33.77 |
| KRH38141 | Soybean | nucleus, plastid | 31.87 | 32.98 |
| KRH71914 | Soybean | nucleus, plastid | 30.31 | 32.68 |
| PGSC0003DMT400029751 | Potato | nucleus | 29.79 | 30.91 |
| Solyc10g078700.1.1 | Tomato | nucleus | 29.53 | 30.65 |
| CDX79888 | Canola | nucleus | 28.24 | 29.62 |
| AT2G42200.1 | Thale cress | nucleus | 28.76 | 29.6 |
| CDY06881 | Canola | nucleus | 27.72 | 29.48 |
| Bra016891.1-P | Field mustard | nucleus | 27.72 | 29.48 |
| CDY14818 | Canola | nucleus | 27.98 | 29.43 |
| CDX98259 | Canola | nucleus | 24.61 | 29.23 |
| CDY53504 | Canola | nucleus | 27.98 | 29.19 |
| Bra004674.1-P | Field mustard | nucleus | 27.2 | 28.46 |
| CDY61750 | Canola | nucleus | 22.54 | 28.25 |
| Bra003305.1-P | Field mustard | nucleus | 23.06 | 28.16 |
| CDY47656 | Canola | nucleus | 23.58 | 28.09 |
| CDX67715 | Canola | nucleus | 22.54 | 27.53 |
| AT3G57920.1 | Thale cress | nucleus | 24.35 | 26.55 |
| Bra014599.1-P | Field mustard | nucleus | 20.47 | 26.16 |
| TraesCS2B01G432700.1 | Wheat | nucleus | 23.06 | 25.21 |
| TraesCS6B01G183400.1 | Wheat | nucleus | 20.73 | 24.46 |
| TraesCS2B01G530400.1 | Wheat | nucleus | 23.58 | 22.3 |
| TraesCS7B01G158500.1 | Wheat | nucleus | 22.54 | 21.27 |
| TraesCS3B01G468400.1 | Wheat | nucleus | 22.8 | 21.26 |
| TraesCS7B01G402300.1 | Wheat | nucleus | 20.98 | 20.77 |
| TraesCS7B01G402400.1 | Wheat | nucleus | 19.95 | 19.2 |
| TraesCS7B01G402200.1 | Wheat | nucleus | 20.73 | 19.18 |
| TraesCS5B01G286000.1 | Wheat | nucleus | 21.5 | 19.17 |
| TraesCS6B01G138400.1 | Wheat | nucleus | 23.32 | 19.03 |
| TraesCS6B01G180300.1 | Wheat | nucleus | 19.17 | 16.74 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G144900.1 | EnsemblPlantsGene:TraesCS7B01G144900 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR004333 |
| InterPro:IPR036893 | InterPro:SBP_dom | InterPro:SBP_sf | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF67 | PFAM:PF03110 |
| PFscan:PS51141 | SEG:seg | SUPFAM:SSF103612 | MapMan:15.5.18 | : | : |
Description
No Description!
Coordinates
chr7B:+:187777396..187781477
Molecular Weight (calculated)
40244.5 Da
IEP (calculated)
8.796
GRAVY (calculated)
-0.751
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIGSGGCDG SGGDGSGGGG GDDQQRHGLK FGKKIYFEDA TGTGGVNASS SKPPAGGGRK GKAVAAGGAS GSAPPRCQVE GCGVDLSGAK QYHSRHKVCS
101: MHTKEPRVVV AGLEQRFCQQ CSRFHQLPEF DQGKRSCRRR LAGHNERRRK APPGPLASRY GRLAASFEEP GRFRSYLLDF SYPRVPSSVR DAWPGARPGY
201: RMPGEIQWQG NLDLRPHTGA ATGYHGHHAY SSHGGGFPGP ELPPGGCLAG VAADSSCALS LLSTQPWDNT PHGASHDHRS AGFDGHPAGV SPSIMASNYM
301: PPPVSPWGGS RGHEGGRNAP HQQLPHDVAL HEVHHPAGSS QHGHFSGELE LALQGNRTAP GPRGGGDHSS GGGAFDHPGS SSNWSL
101: MHTKEPRVVV AGLEQRFCQQ CSRFHQLPEF DQGKRSCRRR LAGHNERRRK APPGPLASRY GRLAASFEEP GRFRSYLLDF SYPRVPSSVR DAWPGARPGY
201: RMPGEIQWQG NLDLRPHTGA ATGYHGHHAY SSHGGGFPGP ELPPGGCLAG VAADSSCALS LLSTQPWDNT PHGASHDHRS AGFDGHPAGV SPSIMASNYM
301: PPPVSPWGGS RGHEGGRNAP HQQLPHDVAL HEVHHPAGSS QHGHFSGELE LALQGNRTAP GPRGGGDHSS GGGAFDHPGS SSNWSL
001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
Arabidopsis Description
SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.