Factsheet for GSMUA_Achr8P01180_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g10300.t01	Wine grape	nucleus	63.68	56.07
KRH57194	Soybean	cytosol	60.18	53.82
KRH03910	Soybean	cytosol	59.96	53.31
Solyc03g110950.1.1	Tomato	cytosol	61.71	53.21
HORVU3Hr1G088820.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.2	53.08
PGSC0003DMT400039455	Potato	cytosol	61.05	52.35
TraesCS3D01G385500.1	Wheat	cytosol	54.27	47.78
TraesCS3B01G424600.1	Wheat	cytosol	54.05	47.59
TraesCS3A01G392400.1	Wheat	cytosol	53.83	47.4
TraesCS3A01G392600.1	Wheat	cytosol	49.45	47.28
TraesCS3A01G392500.1	Wheat	cytosol	52.95	46.81
TraesCS3B01G424500.1	Wheat	cytosol	52.74	46.62
TraesCS3D01G385400.1	Wheat	cytosol	52.3	46.23
HORVU3Hr1G088780.2	Barley	cytosol	52.3	45.01
EES01920	Sorghum	cytosol	52.08	44.32
Zm00001d042472_P001	Maize	cytosol	51.86	44.05
GSMUA_Achr1P16230_001	Banana	cytosol	24.07	30.9
GSMUA_Achr1P19470_001	Banana	nucleus	25.6	30.55
GSMUA_AchrUn_...	Banana	cytosol	25.38	30.37
GSMUA_Achr4P23590_001	Banana	cytosol, mitochondrion, nucleus, plastid	19.91	29.55
GSMUA_Achr7P16880_001	Banana	cytosol	24.29	29.29
GSMUA_Achr1P09360_001	Banana	cytosol	23.63	29.27
GSMUA_Achr8P09690_001	Banana	cytosol	26.91	27.58
GSMUA_Achr6P20830_001	Banana	nucleus	34.35	25.74
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome, plastid	26.04	25.16
GSMUA_Achr8P18250_001	Banana	cytosol	25.6	24.43
GSMUA_Achr10P...	Banana	cytosol	25.38	24.27
GSMUA_Achr6P17870_001	Banana	cytosol	22.98	23.54
GSMUA_Achr10P...	Banana	nucleus	22.1	23.01
GSMUA_AchrUn_...	Banana	cytosol	25.38	21.68
GSMUA_Achr6P34550_001	Banana	mitochondrion, nucleus, peroxisome, plastid	28.23	21.11
GSMUA_Achr1P18840_001	Banana	cytosol	27.57	20.52
GSMUA_Achr7P05850_001	Banana	mitochondrion	28.88	20.31
GSMUA_Achr3P30530_001	Banana	cytosol	25.6	20.28
GSMUA_Achr11P...	Banana	plastid	24.95	19.86
GSMUA_Achr8P09400_001	Banana	cytosol	27.79	18.9
GSMUA_Achr1P21300_001	Banana	nucleus	21.23	18.8
GSMUA_Achr4P07320_001	Banana	cytosol	22.98	18.72
GSMUA_Achr5P21440_001	Banana	nucleus, plastid	25.82	16.69
GSMUA_Achr4P19750_001	Banana	cytosol, mitochondrion, nucleus, plastid	29.54	15.66
GSMUA_Achr11P...	Banana	cytosol	26.04	10.8

Protein Annotations

EnsemblPlants:GSMUA_Achr8P01180_001	EnsemblPlants:GSMUA_Achr8T01180_001	EnsemblPlantsGene:GSMUA_Achr8G01180_001	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS
PANTHER:PTHR31636	PANTHER:PTHR31636:SF24	PFAM:PF03514	PFscan:PS50985	SEG:seg	UniParc:UPI0002959C01
UniProt:M0TLM0	MapMan:15.5.12	MapMan:26.9.2.3	:	:	:

Description

gibberellin response modulator protein, putative [Source:GMGC_GENE;Acc:GSMUA_Achr8G01180_001]

Coordinates

chr8:+:970271..971803

Molecular Weight (calculated)

51068.0 Da

IEP (calculated)

6.240

GRAVY (calculated)

-0.274

Length

457 amino acids

Sequence
(BLAST)

001: MSPACYLKPQ EEQLQQLNYN EEGMGDNGAE LGLSNMAKMD LHPVCFNLLP WDHASSAWFS PPLELNRQRK KQRTTNSVAA ITVVGGDDVD DDRSDYARKL
101: RFRDLLRTYK QRISALEVVE ESPESDGIFE DGSGDGMRLV QLLISCAEAV ACRDRAQASA LLCELKASAL VLGTSFQRFG HFVANASILE ALEGESSVHV
201: VDLGMTQGLP HGHQWRQLLD SLAGRGSPPP RRLRITGVGT RVEHLQSIGD ELKSYAASLG IHLEFLVLES NLENLRTDDF EIEQGEVVVV NSILQLHCVV
301: KESRGALNSV LQVIHELSPA VLVLVEQDSS HNGPFFLGRF MEALHYYSAI FDSLDAMLPK YDTRRAKVEQ FHFAEEIKNI VSCEGPARVE RHERVDQWRR
401: RMSRAGFHPA PIKMMAQAKQ WLAKFKPTEG YTIAEEKGCL VLGWKSKPII AASGWKC

Best Arabidopsis Sequence Match ( AT1G14920.1 )
(BLAST)

001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN

Arabidopsis Description

GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.