Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g110950.1.1 | Tomato | cytosol | 95.68 | 96.23 |
| VIT_17s0000g10300.t01 | Wine grape | nucleus | 68.11 | 69.94 |
| KRH57194 | Soybean | cytosol | 60.04 | 62.62 |
| KRH03910 | Soybean | cytosol | 60.04 | 62.26 |
| GSMUA_Achr8P01180_001 | Banana | nucleus | 52.35 | 61.05 |
| HORVU3Hr1G088820.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 24.39 | 50.0 |
| TraesCS3D01G385500.1 | Wheat | cytosol | 47.84 | 49.13 |
| TraesCS3A01G392400.1 | Wheat | cytosol | 47.84 | 49.13 |
| TraesCS3B01G424600.1 | Wheat | cytosol | 47.47 | 48.75 |
| TraesCS3A01G392500.1 | Wheat | cytosol | 46.9 | 48.36 |
| TraesCS3A01G392600.1 | Wheat | cytosol | 43.34 | 48.33 |
| TraesCS3D01G385400.1 | Wheat | cytosol | 46.72 | 48.16 |
| TraesCS3B01G424500.1 | Wheat | cytosol | 46.72 | 48.16 |
| EES01920 | Sorghum | cytosol | 47.84 | 47.49 |
| HORVU3Hr1G088780.2 | Barley | cytosol | 46.72 | 46.89 |
| Zm00001d042472_P001 | Maize | cytosol | 47.28 | 46.84 |
| PGSC0003DMT400052191 | Potato | cytosol | 29.64 | 42.13 |
| PGSC0003DMT400030652 | Potato | cytosol | 25.89 | 33.58 |
| PGSC0003DMT400011839 | Potato | cytosol | 26.64 | 30.34 |
| PGSC0003DMT400058477 | Potato | cytosol | 26.83 | 30.3 |
| PGSC0003DMT400023877 | Potato | cytosol | 22.7 | 29.37 |
| PGSC0003DMT400057265 | Potato | nucleus, plastid | 22.89 | 28.31 |
| PGSC0003DMT400049448 | Potato | nucleus | 22.7 | 23.73 |
| PGSC0003DMT400087504 | Potato | nucleus | 21.58 | 23.66 |
| PGSC0003DMT400040589 | Potato | nucleus | 25.89 | 23.47 |
| PGSC0003DMT400007879 | Potato | plastid | 26.45 | 20.77 |
| PGSC0003DMT400049445 | Potato | cytosol | 16.32 | 20.67 |
| PGSC0003DMT400038574 | Potato | cytosol | 22.33 | 19.48 |
| PGSC0003DMT400043358 | Potato | cytosol | 26.83 | 17.31 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400039455 | EnsemblPlantsGene:PGSC0003DMG400015255 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF24 | PFAM:PF03514 | PFscan:PS50985 | PGSC:PGSC0003DMG400015255 | SEG:seg | UniParc:UPI000296C2AF |
| UniProt:M1B8B1 | MapMan:15.5.12 | MapMan:26.9.2.3 | : | : | : |
Description
DELLA protein RGL1 [Source:PGSC_GENE;Acc:PGSC0003DMG400015255]
Coordinates
chr3:+:50552743..50554344
Molecular Weight (calculated)
59351.2 Da
IEP (calculated)
6.855
GRAVY (calculated)
-0.159
Length
533 amino acids
Sequence
(BLAST)
(BLAST)
001: MIHNMANVFL SLEPCNGDQI GYDPMENGLY LSHHKDLSYS LNPYTSVLKR NAPTNSMIIS TLSNDSGSFK RLRRTPSLGE SFGSNSTFYS TDSSSGGSSN
101: CSLPRIGSTN SVNSLSLQPG IHFRDHVWAL NQRYLAAEAI EEAAADIINQ EEENGEGMKL VQLLITCAEA VACRDKSRAS VLLSELRASA LVFGTSFQRV
201: ASCFMQGLAD RLALVQPLGT VGYVATPAMN KTDIALEKKE EALRLLYETC PHIQFGHFVA NCSILEAFEG ESFIHVVDLG MSLGLPHGHQ WRRLIQSLVN
301: RPGQLPHRLR ITAVGQNIEK LQIIGDELED YARSLGINLE FSAVESNLEN LKPKDIKVYD GEILVVNSIL QLHCVVKESR GALNSVLQVV HELSPKILVL
401: VEQDSSHNGP FFLGRFMEAL HYYSAIFDSL DVMLPKYDTR RAKIEQFYFA EEIKNIVSCE GPARVERHER VDQWRRRMSR AGFQAAPIKM VSQAKQWLAK
501: VNGHEGFTIT EEKGCLVLGW KSKPIVAASC WKC
101: CSLPRIGSTN SVNSLSLQPG IHFRDHVWAL NQRYLAAEAI EEAAADIINQ EEENGEGMKL VQLLITCAEA VACRDKSRAS VLLSELRASA LVFGTSFQRV
201: ASCFMQGLAD RLALVQPLGT VGYVATPAMN KTDIALEKKE EALRLLYETC PHIQFGHFVA NCSILEAFEG ESFIHVVDLG MSLGLPHGHQ WRRLIQSLVN
301: RPGQLPHRLR ITAVGQNIEK LQIIGDELED YARSLGINLE FSAVESNLEN LKPKDIKVYD GEILVVNSIL QLHCVVKESR GALNSVLQVV HELSPKILVL
401: VEQDSSHNGP FFLGRFMEAL HYYSAIFDSL DVMLPKYDTR RAKIEQFYFA EEIKNIVSCE GPARVERHER VDQWRRRMSR AGFQAAPIKM VSQAKQWLAK
501: VNGHEGFTIT EEKGCLVLGW KSKPIVAASC WKC
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Arabidopsis Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.