CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57194	Soybean	cytosol	93.58	94.13
VIT_17s0000g10300.t01	Wine grape	nucleus	65.37	64.74
Solyc03g110950.1.1	Tomato	cytosol	62.65	60.75
PGSC0003DMT400039455	Potato	cytosol	62.26	60.04
GSMUA_Achr8P01180_001	Banana	nucleus	53.31	59.96
TraesCS3D01G385500.1	Wheat	cytosol	48.25	47.78
HORVU3Hr1G088820.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	24.12	47.69
TraesCS3B01G424600.1	Wheat	cytosol	48.05	47.59
TraesCS3A01G392400.1	Wheat	cytosol	47.86	47.4
TraesCS3D01G385400.1	Wheat	cytosol	46.89	46.62
TraesCS3A01G392500.1	Wheat	cytosol	46.89	46.62
TraesCS3B01G424500.1	Wheat	cytosol	46.69	46.42
TraesCS3A01G392600.1	Wheat	cytosol	43.0	46.23
HORVU3Hr1G088780.2	Barley	cytosol	46.69	45.2
EES01920	Sorghum	cytosol	45.72	43.76
Zm00001d042472_P001	Maize	cytosol	45.72	43.68
KRG92263	Soybean	cytosol	26.65	34.34
KRH13057	Soybean	cytosol	34.24	31.71
KRH44884	Soybean	cytosol	26.26	31.18
KRH34954	Soybean	cytosol	24.12	30.62
KRH29015	Soybean	cytosol	16.73	30.18
KRH77666	Soybean	endoplasmic reticulum, nucleus, peroxisome, plastid	26.46	29.25
KRH34544	Soybean	cytosol	27.63	29.1
KRH27822	Soybean	nucleus, plastid	26.46	28.75
KRH63032	Soybean	cytosol	28.02	28.63
KRH29089	Soybean	mitochondrion	24.51	28.51
KRH29080	Soybean	cytosol	25.1	28.35
KRH54840	Soybean	cytosol	27.82	28.32
KRH08555	Soybean	cytosol	25.68	28.03
KRH24106	Soybean	cytosol, nucleus, peroxisome	24.71	27.91
KRG91825	Soybean	nucleus	24.9	27.53
KRH70202	Soybean	cytosol	25.49	27.52
KRH62871	Soybean	cytosol	23.54	27.31
KRH24117	Soybean	plastid	23.54	27.19
KRH06900	Soybean	plastid	35.8	26.82
KRH58636	Soybean	nucleus	27.24	26.77
KRH42544	Soybean	cytosol, nucleus, plastid	26.65	26.5
KRG94590	Soybean	plastid	35.02	26.43
KRH29971	Soybean	cytosol	22.57	26.24
KRG97933	Soybean	nucleus	28.4	25.0
KRH30942	Soybean	cytosol	28.6	24.71
KRH24039	Soybean	cytosol	21.6	23.08
KRH57249	Soybean	plastid	27.43	21.23
KRH19587	Soybean	cytosol	21.4	20.91
KRH03976	Soybean	mitochondrion, nucleus	26.46	20.33
KRH32212	Soybean	cytosol	21.01	20.11
KRH40615	Soybean	nucleus, plastid	25.88	16.16
KRH00551	Soybean	nucleus, plastid	26.07	15.91

Protein Annotations

EntrezGene:100813548	MapMan:15.5.12	MapMan:26.9.2.3	EMBL:ACUP02010367	EnsemblPlantsGene:GLYMA_17G127500	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1MUM2	InterPro:IPR005202
EnsemblPlants:KRH03910	ProteinID:KRH03910	ProteinID:KRH03910.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636
PANTHER:PTHR31636:SF24	InterPro:TF_GRAS	UniParc:UPI000233EF5F	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr17:-:10181173..10182980

Molecular Weight (calculated)

57807.3 Da

IEP (calculated)

6.453

GRAVY (calculated)

-0.154

Length

514 amino acids

Sequence
(BLAST)

001: MAPLYSAFNG EIDGENLPLA FDIWATNLWA YGYYPHQPAI SENSSSKLVD FPFCDGTIIR DNKRVKRTVC FPIYNSVSCH SFFNTNSSSR NSIPKLHFRD
101: HIRTYTQRYL AAEPVEEASE DTNSSESSGG EEDGCADGVR LVQLLIACAE AVACRDKSHA SILLSELKAN ALVFGSSFQR VASCFVQGLT ERLNLIQPIG
201: SAGPMMAPAM NIMDAASDEM EEAYRLVYEL CPHIQFGHYL ANSTVLEAFE GESFVHVVDL GMSLGLRHGH QWRALIQSLA NRASGERVRR LRITGVGLCV
301: RLQTIGEELS VYANNLGINL EFSVVNKNLE NLKPEDIEVR EEEVLVVNSI LQLHCVVKES RGALNSVLQM IHGLGPKVLV MVEQDSSHNG PFFLGRFMES
401: LHYYSSIFDS LDVMLPKYDT KRAKMEQFYF AEEIKNIVSC EGPLRMERHE RVDQWRRRMS RAGFQAAPIK MVAQSKQWLL KNKVCEGYTV VEEKGCLVFG
501: WKSRPIVAVS CWKC

Best Arabidopsis Sequence Match ( AT1G14920.1 )
(BLAST)

001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN

Arabidopsis Description

GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.