Factsheet for AT1G66350.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039762.1-P	Field mustard	cytosol	82.78	86.68
CDY70426	Canola	cytosol	85.13	85.8
CDY55037	Canola	cytosol	85.13	85.8
AT5G17490.1	Thale cress	cytosol	63.01	61.57
AT3G03450.1	Thale cress	nucleus	65.75	61.43
VIT_14s0006g00640.t01	Wine grape	cytosol	67.32	60.46
AT1G14920.1	Thale cress	nucleus	61.45	58.91
KRG97933	Soybean	nucleus	67.32	58.9
KRH30942	Soybean	cytosol	67.71	58.15
Solyc11g011260.1.1	Tomato	nucleus	65.36	56.8
PGSC0003DMT400040589	Potato	nucleus	65.36	56.8
AT2G01570.1	Thale cress	mitochondrion, nucleus	61.84	53.83
AT5G41920.1	Thale cress	cytosol	24.27	30.62
AT1G50420.1	Thale cress	cytosol	27.98	29.67
AT1G55580.1	Thale cress	plastid	24.27	27.87
AT5G66770.1	Thale cress	cytosol	25.64	22.43
AT3G54220.1	Thale cress	nucleus, plastid	28.57	22.36
AT3G50650.1	Thale cress	cytosol	23.29	21.96
AT1G63100.2	Thale cress	plastid	28.18	21.88

Protein Annotations

Gene3D:1.10.10.1290	MapMan:11.6.2.2	MapMan:15.5.12	MapMan:26.6.2.1	EntrezGene:842953	ProteinID:AAG52171.1
ProteinID:AEE34499.1	ArrayExpress:AT1G66350	EnsemblPlantsGene:AT1G66350	RefSeq:AT1G66350	TAIR:AT1G66350	RefSeq:AT1G66350-TAIR-G
EnsemblPlants:AT1G66350.1	TAIR:AT1G66350.1	EMBL:AY048749	EMBL:AY070035	EMBL:AY096506	ProteinID:CAA12242.1
InterPro:DELLA_N_sf	GO:GO:0000003	GO:GO:0000989	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0003712	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009739	GO:GO:0009740	GO:GO:0009791	GO:GO:0009908	GO:GO:0009938	GO:GO:0009987
GO:GO:0010187	GO:GO:0030154	GO:GO:0043565	GO:GO:2000033	InterPro:IPR005202	InterPro:IPR038088
RefSeq:NP_176809.1	PFAM:PF03514	PFAM:PF12041	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0009066	PO:PO:0020003	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS50985
PANTHER:PTHR31636	PANTHER:PTHR31636:SF47	UniProt:Q9C8Y3	Symbol:RGL1	SMART:SM01129	InterPro:TF_DELLA
InterPro:TF_DELLA_N	InterPro:TF_GRAS	UniParc:UPI00000A9E17	SEG:seg	:	:

Description

RGL1DELLA protein RGL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y3]

Coordinates

chr1:+:24748105..24750186

Molecular Weight (calculated)

56757.5 Da

IEP (calculated)

5.467

GRAVY (calculated)

-0.204

Length

511 amino acids

Sequence
(BLAST)

001: MKREHNHRES SAGEGGSSSM TTVIKEEAAG VDELLVVLGY KVRSSDMADV AHKLEQLEMV LGDGISNLSD ETVHYNPSDL SGWVESMLSD LDPTRIQEKP
101: DSEYDLRAIP GSAVYPRDEH VTRRSKRTRI ESELSSTRSV VVLDSQETGV RLVHALLACA EAVQQNNLKL ADALVKHVGL LASSQAGAMR KVATYFAEGL
201: ARRIYRIYPR DDVALSSFSD TLQIHFYESC PYLKFAHFTA NQAILEVFAT AEKVHVIDLG LNHGLQWPAL IQALALRPNG PPDFRLTGIG YSLTDIQEVG
301: WKLGQLASTI GVNFEFKSIA LNNLSDLKPE MLDIRPGLES VAVNSVFELH RLLAHPGSID KFLSTIKSIR PDIMTVVEQE ANHNGTVFLD RFTESLHYYS
401: SLFDSLEGPP SQDRVMSELF LGRQILNLVA CEGEDRVERH ETLNQWRNRF GLGGFKPVSI GSNAYKQASM LLALYAGADG YNVEENEGCL LLGWQTRPLI
501: ATSAWRINRV E

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.