Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007056.1-P | Field mustard | mitochondrion, plastid | 47.78 | 98.73 |
| CDX73496 | Canola | nucleus, plastid | 84.53 | 88.75 |
| CDX78219 | Canola | nucleus, plastid | 81.78 | 88.56 |
| KXG22896 | Sorghum | cytosol, plasma membrane | 53.45 | 66.22 |
| GSMUA_Achr11P... | Banana | plastid | 54.82 | 62.37 |
| HORVU5Hr1G045920.2 | Barley | cytosol | 53.6 | 59.83 |
| TraesCS4A01G191300.1 | Wheat | cytosol | 54.52 | 57.7 |
| TraesCS5B01G143100.1 | Wheat | plastid | 55.28 | 56.58 |
| Os11t0124300-01 | Rice | nucleus, plastid | 55.9 | 56.07 |
| Os12t0122000-01 | Rice | plastid | 56.51 | 55.91 |
| TraesCS5A01G144000.1 | Wheat | plastid | 55.28 | 55.71 |
| Zm00001d052380_P001 | Maize | plastid | 56.97 | 55.69 |
| TraesCS5D01G148000.1 | Wheat | plastid | 55.44 | 55.44 |
| GSMUA_Achr8P09400_001 | Banana | cytosol | 56.51 | 54.91 |
| AT5G41920.1 | Thale cress | cytosol | 33.54 | 54.07 |
| Zm00001d005029_P001 | Maize | plastid | 55.59 | 53.54 |
| TraesCS4D01G122000.1 | Wheat | plastid | 55.59 | 53.46 |
| TraesCS4B01G124000.1 | Wheat | plastid | 55.44 | 53.31 |
| OQU82754 | Sorghum | plastid | 57.73 | 53.02 |
| VIT_08s0056g00050.t01 | Wine grape | nucleus | 63.25 | 52.81 |
| Solyc10g074680.1.1 | Tomato | cytosol | 64.01 | 50.61 |
| PGSC0003DMT400043358 | Potato | cytosol | 63.55 | 50.24 |
| GSMUA_Achr5P21440_001 | Banana | nucleus, plastid | 54.21 | 50.07 |
| KRH40615 | Soybean | nucleus, plastid | 61.72 | 48.97 |
| KRH00551 | Soybean | nucleus, plastid | 61.87 | 47.98 |
| AT1G55580.1 | Thale cress | plastid | 20.98 | 30.79 |
| AT1G50420.1 | Thale cress | cytosol | 21.13 | 28.63 |
| AT1G66350.1 | Thale cress | cytosol | 22.36 | 28.57 |
| AT1G14920.1 | Thale cress | nucleus | 22.82 | 27.95 |
| AT5G17490.1 | Thale cress | cytosol | 22.21 | 27.72 |
| AT3G03450.1 | Thale cress | nucleus | 22.66 | 27.06 |
| AT2G01570.1 | Thale cress | mitochondrion, nucleus | 23.12 | 25.72 |
| AT5G66770.1 | Thale cress | cytosol | 21.44 | 23.97 |
| AT3G50650.1 | Thale cress | cytosol | 19.14 | 23.06 |
| AT1G63100.2 | Thale cress | plastid | 21.9 | 21.73 |
Protein Annotations
| MapMan:15.5.12 | MapMan:26.3.1.5 | PDB:5B3G | PDB:5B3H | EntrezGene:824589 | ProteinID:AAB06318.1 |
| ProteinID:AEE79200.1 | ArrayExpress:AT3G54220 | EnsemblPlantsGene:AT3G54220 | RefSeq:AT3G54220 | TAIR:AT3G54220 | RefSeq:AT3G54220-TAIR-G |
| EnsemblPlants:AT3G54220.1 | TAIR:AT3G54220.1 | EMBL:AY056315 | EMBL:AY080840 | EMBL:AY113991 | Unigene:At.932 |
| ProteinID:CAB70996.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008356 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009606 | GO:GO:0009628 | GO:GO:0009630 |
| GO:GO:0009956 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0048366 | GO:GO:0051457 |
| GO:GO:0090610 | InterPro:IPR005202 | RefSeq:NP_190990.1 | PFAM:PF03514 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005059 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020149 | PO:PO:0025022 | PFscan:PS50985 | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF12 | UniProt:Q9M384 | Symbol:SCR | InterPro:TF_GRAS | UniParc:UPI00000A9299 | SEG:seg |
Description
SCRProtein SCARECROW [Source:UniProtKB/Swiss-Prot;Acc:Q9M384]
Coordinates
chr3:+:20069987..20072878
Molecular Weight (calculated)
71509.5 Da
IEP (calculated)
6.171
GRAVY (calculated)
-0.397
Length
653 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESGDFNGG QPPPHSPLRT TSSGSSSSNN RGPPPPPPPP LVMVRKRLAS EMSSNPDYNN SSRPPRRVSH LLDSNYNTVT PQQPPSLTAA ATVSSQPNPP
101: LSVCGFSGLP VFPSDRGGRN VMMSVQPMDQ DSSSSSASPT VWVDAIIRDL IHSSTSVSIP QLIQNVRDII FPCNPNLGAL LEYRLRSLML LDPSSSSDPS
201: PQTFEPLYQI SNNPSPPQQQ QQHQQQQQQH KPPPPPIQQQ ERENSSTDAP PQPETVTATV PAVQTNTAEA LRERKEEIKR QKQDEEGLHL LTLLLQCAEA
301: VSADNLEEAN KLLLEISQLS TPYGTSAQRV AAYFSEAMSA RLLNSCLGIY AALPSRWMPQ THSLKMVSAF QVFNGISPLV KFSHFTANQA IQEAFEKEDS
401: VHIIDLDIMQ GLQWPGLFHI LASRPGGPPH VRLTGLGTSM EALQATGKRL SDFADKLGLP FEFCPLAEKV GNLDTERLNV RKREAVAVHW LQHSLYDVTG
501: SDAHTLWLLQ RLAPKVVTVV EQDLSHAGSF LGRFVEAIHY YSALFDSLGA SYGEESEERH VVEQQLLSKE IRNVLAVGGP SRSGEVKFES WREKMQQCGF
601: KGISLAGNAA TQATLLLGMF PSDGYTLVDD NGTLKLGWKD LSLLTASAWT PRS
101: LSVCGFSGLP VFPSDRGGRN VMMSVQPMDQ DSSSSSASPT VWVDAIIRDL IHSSTSVSIP QLIQNVRDII FPCNPNLGAL LEYRLRSLML LDPSSSSDPS
201: PQTFEPLYQI SNNPSPPQQQ QQHQQQQQQH KPPPPPIQQQ ERENSSTDAP PQPETVTATV PAVQTNTAEA LRERKEEIKR QKQDEEGLHL LTLLLQCAEA
301: VSADNLEEAN KLLLEISQLS TPYGTSAQRV AAYFSEAMSA RLLNSCLGIY AALPSRWMPQ THSLKMVSAF QVFNGISPLV KFSHFTANQA IQEAFEKEDS
401: VHIIDLDIMQ GLQWPGLFHI LASRPGGPPH VRLTGLGTSM EALQATGKRL SDFADKLGLP FEFCPLAEKV GNLDTERLNV RKREAVAVHW LQHSLYDVTG
501: SDAHTLWLLQ RLAPKVVTVV EQDLSHAGSF LGRFVEAIHY YSALFDSLGA SYGEESEERH VVEQQLLSKE IRNVLAVGGP SRSGEVKFES WREKMQQCGF
601: KGISLAGNAA TQATLLLGMF PSDGYTLVDD NGTLKLGWKD LSLLTASAWT PRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.