Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023170.1-P | Field mustard | nucleus | 54.15 | 54.15 |
| CDY02371 | Canola | cytosol | 39.71 | 46.03 |
| KRH27180 | Soybean | plastid | 20.22 | 34.78 |
| VIT_01s0011g01670.t01 | Wine grape | nucleus | 28.16 | 30.71 |
| KRH17259 | Soybean | plastid | 26.35 | 26.74 |
| PGSC0003DMT400026858 | Potato | mitochondrion, nucleus | 25.27 | 25.83 |
| KRH72903 | Soybean | cytosol | 26.71 | 25.52 |
| Solyc02g069170.1.1 | Tomato | mitochondrion | 25.63 | 25.36 |
| Os02t0699900-01 | Rice | cytosol, nucleus, plastid | 21.3 | 24.69 |
| EES07408 | Sorghum | mitochondrion, plastid | 21.3 | 23.89 |
| Zm00001d000165_P001 | Maize | mitochondrion | 20.94 | 23.29 |
| Zm00001d050853_P001 | Maize | cytosol | 17.33 | 20.96 |
| AT4G34340.1 | Thale cress | nucleus | 23.1 | 18.13 |
| AT3G02160.1 | Thale cress | cytosol | 23.47 | 16.37 |
| AT5G15570.1 | Thale cress | nucleus | 20.58 | 14.96 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.3.5.3.8 | EntrezGene:840012 | ProteinID:AAD21690.1 | ProteinID:AEE31331.1 | EMBL:AK229436 |
| ArrayExpress:AT1G31240 | EnsemblPlantsGene:AT1G31240 | RefSeq:AT1G31240 | TAIR:AT1G31240 | RefSeq:AT1G31240-TAIR-G | EnsemblPlants:AT1G31240.1 |
| TAIR:AT1G31240.1 | Unigene:At.40389 | EMBL:BT010198 | InterPro:BTP | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | RefSeq:NP_174409.1 | PFAM:PF07524 |
| PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF38 | UniProt:Q9SA19 | SMART:SM00576 | SUPFAM:SSF47113 |
| UniParc:UPI00000A9518 | SEG:seg | : | : | : | : |
Description
At1g31240 [Source:UniProtKB/TrEMBL;Acc:Q9SA19]
Coordinates
chr1:-:11163858..11164928
Molecular Weight (calculated)
30963.2 Da
IEP (calculated)
7.792
GRAVY (calculated)
-0.595
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRRRRNSKL KFEETSDQSP TSTAEFSFSL TKIAVSQICQ SIGYKATDAS ALNTLTLTTT KFLQSLAELA SSFSNTANRT EVNLFDIVNG LQDIALSTSD
101: CFPGGSTVHD IESQCLIKSA VLRNLSDFVT YAPEIPFAKP LPRRERDGSF GGDLDHVAVT RSVDVTSVPA WLPPFPDSSL CSDRCSKDNR SDHLWENSDS
201: VIRREILPES LKSKSGGRLP VMRDKVRFKM EQRDWSSGGD TRLERSRDNN NGESGRDLEV KKKIREGYTY CAGEWPF
101: CFPGGSTVHD IESQCLIKSA VLRNLSDFVT YAPEIPFAKP LPRRERDGSF GGDLDHVAVT RSVDVTSVPA WLPPFPDSSL CSDRCSKDNR SDHLWENSDS
201: VIRREILPES LKSKSGGRLP VMRDKVRFKM EQRDWSSGGD TRLERSRDNN NGESGRDLEV KKKIREGYTY CAGEWPF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.