CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45059	Soybean	cytosol	94.23	94.23
VIT_14s0068g00340.t01	Wine grape	nucleus	54.07	54.64
GSMUA_Achr9P26740_001	Banana	nucleus	37.53	43.73
GSMUA_Achr11P...	Banana	nucleus	39.9	42.11
GSMUA_Achr9P09310_001	Banana	nucleus	34.65	39.64
KRH19914	Soybean	cytosol	36.75	39.55
Zm00001d041530_P001	Maize	cytosol	36.22	38.66
KRH32528	Soybean	cytosol	35.43	37.92
EES17247	Sorghum	cytosol	35.96	37.23
Zm00001d041766_P001	Maize	cytosol	35.7	36.76
EES15849	Sorghum	cytosol	36.22	36.7
Os12t0574800-02	Rice	nucleus	34.65	36.07
TraesCS5D01G090900.1	Wheat	cytosol, nucleus, plastid	33.86	35.83
TraesCS5B01G084700.1	Wheat	cytosol	33.86	35.64
TraesCS5A01G081700.1	Wheat	cytosol	33.86	35.64
KRH27180	Soybean	plastid	14.44	34.16
TraesCS7D01G036000.1	Wheat	mitochondrion	29.92	33.53
Bra008690.1-P	Field mustard	nucleus	31.76	33.43
CDY43254	Canola	nucleus	30.71	32.5
TraesCSU01G065200.1	Wheat	cytosol	30.18	32.39
CDY60474	Canola	nucleus	32.02	32.36
Os03t0603300-01	Rice	cytosol, plastid	23.62	32.26
Bra039159.1-P	Field mustard	nucleus	31.76	32.1
AT5G15570.1	Thale cress	nucleus	31.76	31.76
TraesCS7A01G040600.1	Wheat	cytosol, mitochondrion	28.87	31.43
Bra023525.1-P	Field mustard	cytosol	30.71	31.03
Bra001033.1-P	Field mustard	cytosol	30.45	30.69
AT3G02160.1	Thale cress	cytosol	31.76	30.48
CDX74271	Canola	cytosol	29.4	29.87
CDX91978	Canola	cytosol, extracellular, nucleus	30.18	29.56
HORVU7Hr1G006990.9	Barley	mitochondrion, plastid	25.98	25.19
KRH17259	Soybean	plastid	17.59	24.54
KRH72903	Soybean	cytosol	17.59	23.1

Protein Annotations

Gene3D:1.10.20.10	EntrezGene:100815889	MapMan:15.3.5.3.8	EMBL:ACUP02011511	InterPro:BTP	EnsemblPlantsGene:GLYMA_18G268800
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005654	GO:GO:0005669	GO:GO:0046982	InterPro:Histone-fold	UniProt:I1N4L8
InterPro:IPR009072	ProteinID:KRH01309.1	ProteinID:KRH01310.1	ProteinID:KRH01311.1	ProteinID:KRH01312.1	EnsemblPlants:KRH01313
ProteinID:KRH01313	ProteinID:KRH01313.1	PFAM:PF07524	PFAM:PF10406	PANTHER:PTHR12321	PANTHER:PTHR12321:SF53
SMART:SM00576	InterPro:TAF8	InterPro:TFIID_su8_C	UniParc:UPI000233ECB9	:	:

Description

hypothetical protein

Coordinates

chr18:+:55254050..55258213

Molecular Weight (calculated)

41860.6 Da

IEP (calculated)

5.042

GRAVY (calculated)

-0.501

Length

381 amino acids

Sequence
(BLAST)

001: MSNGGGKTGR QLEQPGTWRR RKVGGGDDYA RAIAKIAVAQ VCEGEGFQAF QQSALEALSD VVVRYILNVG KSAHCHANLS GRTECNAFDV IQGLEDMGSV
101: QGFAGAADVD HCLESSGVIR EIVHFVNDAE PVMFAHPIPR FPVVKERVPN PSFLQKGEEP PGEHIPAWLP AFPDPQTYSQ SPAVNGRGTE PRAVKFDQER
201: ESGKGEWPAL NLQQQMVSNM FEKSASIDPA DAKAKRVAAE GNPFLAAPLK IEDKEVASVP PPAKLFNDEA LDNPVVENLV ENEPISALET FAPAIEAMKS
301: TICDSKEDQT KFCANEKPTV RFKIGIKNKL LGKSIGLIPQ KEEHEKTLPW FAMEDEKDDR KRRAEKILRE SLENPDQLVQ L

Best Arabidopsis Sequence Match ( AT3G02160.2 )
(BLAST)

001: MVLHVMLGEV VTKFLNMNNG VGEGGSQQRE LHGKRKLFRG NDFAFSIARM AVAQICESVE VNPYQESQTR EGVRFSSFQE SALDTLTDVA VQYIQSIGKT
101: AHLYANLAGR VDGNSLDILQ ALEDLGSGLG FAGVSDTDHC LADSGVVKDI IRYTGEAEEI PFVYSLPRFP FSKEKKPAPS FSEVGAEPPD EHIPVWLPAF
201: PETELCDRSE ETNAATIEGE IPSKENGSSL PSMQLSFDGG GRLEIHKSSK DVGESTEAVV EGNLFLTAPL RFVEKNVSPV VRPLELSNEV VRTNHVPDKH
301: VRNNHHIPIL EASAPSDKIN NKNWLAISKD VEKVDVARKE LTLVRFKIGT TKRSMCLAKN RSFQEEGWFQ EGEDKREKTS EIKEKRERID SQLSTQM

Arabidopsis Description

At3g02160 [Source:UniProtKB/TrEMBL;Acc:Q9S7R9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.