Factsheet for HORVU7Hr1G006990.9

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G022460.1
HORVU1Hr1G024140.1
HORVU3Hr1G084430.4
HORVU3Hr1G085840.7
HORVU4Hr1G034590.13
HORVU6Hr1G032840.2
HORVU6Hr1G062340.1
HORVU7Hr1G006990.9
HORVU7Hr1G113760.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34340.1	HORVU1Hr1G024140.1	AT1G02680.1	17340043
AT4G34340.1	HORVU3Hr1G085840.7	AT1G17440.1	17340043
AT4G34340.1	HORVU6Hr1G032840.2	AT1G17440.1	17340043
AT4G34340.1	HORVU4Hr1G034590.13	AT1G27720.1	17340043
AT4G34340.1	HORVU6Hr1G062340.1	AT1G27720.1	17340043
AT4G34340.1	HORVU3Hr1G084430.4	AT3G10070.1	17340043
AT4G34340.1	HORVU7Hr1G006990.9	AT4G34340.1	17340043
AT4G34340.1	HORVU0Hr1G022460.1	AT5G25150.1	17340043
AT4G34340.1	HORVU7Hr1G113760.2	AT5G25150.1	17340043

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G065200.1	Wheat	cytosol	52.67	58.31
TraesCS7A01G040600.1	Wheat	cytosol, mitochondrion	51.15	57.43
TraesCS7D01G036000.1	Wheat	mitochondrion	48.85	56.47
Os03t0603300-01	Rice	cytosol, plastid	27.23	38.35
GSMUA_Achr9P26740_001	Banana	nucleus	26.21	31.5
GSMUA_Achr11P...	Banana	nucleus	28.5	31.02
VIT_08s0040g01420.t01	Wine grape	cytosol, nucleus, plastid	26.21	27.99
KRH19914	Soybean	cytosol	24.68	27.4
KRH32528	Soybean	cytosol	24.68	27.25
Solyc09g008150.1.1	Tomato	nucleus	25.7	27.08
VIT_14s0068g00340.t01	Wine grape	nucleus	25.7	26.79
PGSC0003DMT400009911	Potato	nucleus	25.19	26.47
GSMUA_Achr9P09310_001	Banana	nucleus	22.39	26.43
Bra008690.1-P	Field mustard	nucleus	24.17	26.24
KRH01313	Soybean	cytosol	25.19	25.98
CDY43254	Canola	nucleus	23.41	25.56
KRH45059	Soybean	cytosol	24.43	25.2
Bra023525.1-P	Field mustard	cytosol	23.66	24.67
Bra039159.1-P	Field mustard	nucleus	23.66	24.67
CDY60474	Canola	nucleus	23.41	24.4
AT3G02160.1	Thale cress	cytosol	23.92	23.68
AT5G15570.1	Thale cress	nucleus	22.9	23.62
Bra011521.1-P	Field mustard	nucleus	20.61	23.41
AT4G34340.1	Thale cress	nucleus	20.87	23.23
CDX75423	Canola	nucleus	20.36	23.05
CDX74271	Canola	cytosol	21.88	22.93
CDY69783	Canola	nucleus	20.36	22.28
Bra001033.1-P	Field mustard	cytosol	21.37	22.22
CDX91978	Canola	cytosol, extracellular, nucleus	21.37	21.59

Protein Annotations

EnsemblPlants:HORVU7Hr1G006990.9	EnsemblPlantsGene:HORVU7Hr1G006990	Gene3D:1.10.20.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046982	InterPro:BTP	InterPro:Histone-fold	InterPro:IPR009072	PANTHER:PTHR12321	PANTHER:PTHR12321:SF45
PFAM:PF07524	SEG:seg	SMART:SM00576	UniParc:UPI000B47525F	UniProt:A0A287VFI4	MapMan:15.3.5.3.8

Description

No Description!

Coordinates

chrchr7H:-:9453724..9456828

Molecular Weight (calculated)

41233.0 Da

IEP (calculated)

10.252

GRAVY (calculated)

-0.383

Length

393 amino acids

Sequence
(BLAST)

001: RKAKQRKGNQ SPTVQTLTKP TKPNPRSIPC RIRTAAFKSP TPEPLHQSIN QIDASAASLP LDPAEAAARP AALASSGSAR AGRGGMGSDE FGRAAARAAV
101: ARTLQAAGFA SGSSSAVDAL ADVMLRYLRL LGGAATAHAN HAGRAAPNEL DVVQFLEETG EAYQGFEGAS STRRGCLQSS GVVRDLVAFA DAARDGPTSA
201: SQRLPRFPVQ HAPPSPPSAA SFAALGKRTG MGHVPAWLPA FPECAMAAEE EPGEKVGGRA VDEVEQVCRE RNAGKSLLGL QRQLALAGGD GICKGDELNM
301: AGIKSNPFLD SALCCGVKEV PVVAMPNLGK KRSVLESFAP AFTGSEVEGK DQDQGRGRKR MVPKERPPVY FKIGTDRRKS RVMAWNSRDF GGL

Best Arabidopsis Sequence Match ( AT5G15570.1 )
(BLAST)

001: MINGGGEGGS QRRELQGKRS MSRGNDFAYA LARMATAQIC ESVEINSYQE SSQSREGLRF SSFQETALET LTDVVIQYIQ NIGKTAQFYV NMAGRVESNA
101: LDIVQALEDL GSGLGFDGAH DVEHCLADSG VVKDIIRYTG EAEEIPFVYS LPRFPFNRGK RPAPSFSDIG VEPPDEHIPV WLPAFPETKM SNGSEEINVD
201: KIERDVQSRD NGSSLMSVQQ SVDVDRLKVQ KSMDQKDVQK PIEEPEGNPF LAAPIWVGEK NVSLSRVVCP SELRKEEIST NHLPEKHMSM SHHIPALEAY
301: ALSDKINDKN RLAGMEDEQK RDGARTQGAL LRFKIGTRKA SECWKINQCL EEKGWFKEDG NKREKKVERE EKSESIDADV K

Arabidopsis Description

Bromodomain transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LF25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.