Factsheet for Bra007146.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000638.1-P
Bra002404.1-P
Bra006620.1-P
Bra007233.1-P
Bra012987.1-P
Bra014303.1-P
Bra018938.1-P
Bra026812.1-P
Bra029188.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55150.1	Bra026812.1-P	AT1G14687.1	21798944
AT3G55150.1	Bra014303.1-P	AT1G51950.1	21798944
AT3G55150.1	Bra018938.1-P	AT1G51950.1	21798944
AT3G55150.1	Bra007233.1-P	AT3G56270.1	21798944
AT3G55150.1	Bra000638.1-P	AT4G08150.1	21798944
AT3G55150.1	Bra002404.1-P	AT5G22310.1	21798944
AT3G55150.1	Bra006620.1-P	AT5G22310.1	21798944
AT3G55150.1	Bra029188.1-P	AT5G51110.1	21798944
AT3G55150.1	Bra012987.1-P	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40204	Canola	plastid	97.46	98.24
Bra014771.1-P	Field mustard	plastid	86.8	86.39
AT3G55150.1	Thale cress	plastid	85.53	84.59
Bra017078.1-P	Field mustard	cytosol	59.78	67.63
Bra005044.1-P	Field mustard	cytosol, nucleus, plastid	60.89	66.72
Bra005045.1-P	Field mustard	plastid	67.89	65.9
Bra005046.1-P	Field mustard	plastid	67.09	62.8
VIT_00s0317g00140.t01	Wine grape	plastid	53.1	53.7
PGSC0003DMT400060448	Potato	plastid	47.22	45.83
Bra029772.1-P	Field mustard	cytosol	43.4	44.46
Solyc05g054820.1.1	Tomato	plastid	45.47	44.34
Bra034072.1-P	Field mustard	mitochondrion	41.65	43.09
GSMUA_AchrUn_...	Banana	cytosol	38.31	42.13
GSMUA_Achr10P...	Banana	mitochondrion	40.06	40.98
Bra001305.1-P	Field mustard	mitochondrion	39.75	40.32
Bra006696.1-P	Field mustard	cytosol	38.79	39.35
Bra018685.1-P	Field mustard	cytosol, nucleus, plastid	35.77	38.93
GSMUA_Achr7P15340_001	Banana	mitochondrion	37.68	38.85
Bra035682.1-P	Field mustard	mitochondrion, plastid	36.57	38.33
Bra020294.1-P	Field mustard	cytosol, plastid	37.84	38.33
Bra002537.1-P	Field mustard	cytosol, nucleus, plastid	37.84	37.9
GSMUA_Achr10P...	Banana	cytosol	26.39	36.81
GSMUA_Achr6P34400_001	Banana	mitochondrion	34.82	36.26
Bra003879.1-P	Field mustard	cytosol, nucleus, plastid	27.5	28.88
Bra027373.1-P	Field mustard	cytoskeleton, cytosol, nucleus	26.87	27.35
Bra030907.1-P	Field mustard	cytosol	26.87	26.7
Bra025399.1-P	Field mustard	cytosol	20.99	26.45
Bra020368.1-P	Field mustard	cytosol	19.87	26.15
Bra014060.1-P	Field mustard	plastid	27.82	26.12
Bra023443.1-P	Field mustard	cytosol	17.81	25.69
Bra015543.1-P	Field mustard	cytosol	23.69	24.96
Bra012987.1-P	Field mustard	cytosol	21.62	24.73
Bra022586.1-P	Field mustard	cytosol	23.69	23.58
Bra009523.1-P	Field mustard	cytosol	23.21	22.88
Bra028829.1-P	Field mustard	cytosol	11.61	22.6
Bra006767.1-P	Field mustard	cytosol	21.94	22.33
Bra006183.1-P	Field mustard	nucleus	22.26	22.33
Bra033104.1-P	Field mustard	cytosol	22.89	22.29
Bra008852.1-P	Field mustard	nucleus	21.62	21.18
Bra008789.1-P	Field mustard	cytosol, nucleus, plastid	21.62	19.91
Bra006228.1-P	Field mustard	nucleus	21.46	19.82

Protein Annotations

EnsemblPlants:Bra007146.1	EnsemblPlants:Bra007146.1-P	EnsemblPlantsGene:Bra007146	Gene3D:1.20.1280.170	GO:GO:0000145	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150
GO:GO:0009987	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF26	PFAM:PF03081
SEG:seg	SUPFAM:SSF74788	UniParc:UPI0002542A25	UniProt:M4CSF4	MapMan:22.6.3.1	:

Description

AT3G55150 (E=7e-262) ATEXO70H1 | ATEXO70H1 (exocyst subunit EXO70 family protein H1); protein binding

Coordinates

chrA09:-:27557531..27559420

Molecular Weight (calculated)

71669.3 Da

IEP (calculated)

6.653

GRAVY (calculated)

-0.342

Length

629 amino acids

Sequence
(BLAST)

001: MEKRSKFSFF SSSSPKSLPS SPHSFTSPAS PLHQVFTQST MDEAIERAEA IIKKWDPNTP SFTKIVSLFN HSRKEAKEFI KCARDLRKTM HFLVSQDSQS
101: PKLALAQTLM QIAMTRLEKE FFQILSSNRD KLDPESVSGQ SSTSTNSEFE DDYDEDDDDE MKKANESITK VEKASAVVMS DLKAIAECMI SCGYGKECVK
201: IYKRIRKSIV DEGLSLLGIE AYKGSRLHRT DWVTLDHMIK NWIKAAKIGV TTLFRGEKLL CDHVFSASNS TRESCFYEIA NEAATNLFKF PEFVAKEKKS
301: HERIFSLMDL QAAISDLWQD IEMIFHYDSV SGVKSQALMS LQKLKVSIHN ALTDFESTVH KDSTKALTPG GGIHKLTRST MSFISSLSEH SSVLSEILAD
401: HPLPRNTRLL ESYVIMLEEE EHNHALSVHF AWLILVLLCK LDTKAEHYKD VSLSYLFIAN NLHFIIETVR SSDHLRHLLG EDWITKHDDK LSAYVANYEI
501: SAWSYVYMSL PEEPTELSPE EAKIYFRRFH SAFEEAYMKQ SPRVVPDAKL RDELKVSIAK KLVTEYREFY GKYLPMLGQE RNIEMLVRFK PDNLENYISD
601: LFHGTPILAS SSVSSSSSTS WMSLGRVSS

Best Arabidopsis Sequence Match ( AT3G55150.1 )
(BLAST)

001: MAKMAKFSFF SSSSPKYHPS SPSSFTSFPA SPLNQNFTQA MMEETVETAD SVIRKWDPNT PSFTKIVSLF NHSRKEAKEF IRCVRDLRRA MHFLVSQDSQ
101: SPKLALAQTL MQIAMARLEK EFFQILSSNR DKLDPESVSG QSSISSNSEF EDVMGSDDDD ESDNEMRKAG ESITQVEKAS AMVMSDLKAI AESMISCGYG
201: KECVKIYKRV RKSIVDEGLS LLGIEIYKGS RFHRTDWVTL EHMIKNWIKA AKIGIATLFR GEKLLCDHVF SASNSTRESC FYEIANEAAT NLFKFPEFVA
301: KEKKSHERIF PLMDLQAAIS DLWQDIEMIF HFDAVAGVKS QALTSLQKLK VSIHSALTDF ESIIQKDTTK ALTPGGGIHK LTRSTMNFIS SLSKYSGVLS
401: EILADHPLPR NTRLLESYVR APISEDEQHN HALSVHFAWL ILVLLCKLDT KAEHYKDVSL SYLFLANNLQ IIIETVGSTP LRNLLGDDWL NKHEDKLCAY
501: AGNYEIAAWS NVFMSLPEEP TDLSPEEAKI YFRRFHTAFE EAYMKQSSRV VPNAKLRDEL KVSIAKKLVP EYREFYRKYL PMLGQERNIE ILVRFKPDNL
601: ENYISDLFHG TPIHASSSFS SSSSSSSWKS LGCVSG

Arabidopsis Description

ATEXO70H1Exocyst complex component EXO70H1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY27]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.