Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400071608 | Potato | nucleus | 98.05 | 79.08 |
| Solyc04g080040.2.1 | Tomato | nucleus | 90.59 | 70.44 |
| KRH61195 | Soybean | nucleus | 28.42 | 25.28 |
| VIT_18s0001g12100.t01 | Wine grape | nucleus | 31.44 | 23.11 |
| KRH51877 | Soybean | nucleus | 27.89 | 21.81 |
| Bra015866.1-P | Field mustard | nucleus | 23.09 | 20.38 |
| CDY45410 | Canola | nucleus | 21.49 | 20.37 |
| AT1G75100.1 | Thale cress | nucleus | 23.45 | 20.28 |
| CDX73142 | Canola | nucleus | 20.6 | 19.59 |
| GSMUA_Achr7P25970_001 | Banana | nucleus | 20.07 | 16.35 |
| EER95331 | Sorghum | nucleus, plastid | 17.05 | 16.3 |
| Zm00001d048175_P002 | Maize | nucleus | 17.05 | 16.11 |
| Os03t0198300-02 | Rice | nucleus | 17.23 | 15.98 |
| TraesCS4A01G041000.2 | Wheat | nucleus, plastid | 16.7 | 14.8 |
| TraesCS4D01G261900.1 | Wheat | nucleus, plastid | 16.87 | 14.77 |
| TraesCS4B01G261900.1 | Wheat | nucleus, plastid | 16.7 | 14.73 |
| HORVU4Hr1G070720.5 | Barley | mitochondrion | 17.05 | 14.14 |
| CDY59467 | Canola | mitochondrion | 21.85 | 12.44 |
| PGSC0003DMT400030755 | Potato | nucleus | 2.66 | 7.73 |
| PGSC0003DMT400071173 | Potato | nucleus | 11.72 | 6.92 |
| PGSC0003DMT400052311 | Potato | nucleus | 9.95 | 6.64 |
| PGSC0003DMT400052312 | Potato | cytosol | 1.07 | 5.77 |
| PGSC0003DMT400009048 | Potato | nucleus | 10.83 | 4.23 |
| PGSC0003DMT400009477 | Potato | nucleus | 11.01 | 3.9 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400071606 | EnsemblPlantsGene:PGSC0003DMG401027859 | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF55 | PGSC:PGSC0003DMG401027859 | SEG:seg |
| UniParc:UPI000295D90E | UniProt:M1CP15 | MapMan:35.1 | : | : | : |
Description
J-domain protein required for chloroplast accumulation response 1 [Source:PGSC_GENE;Acc:PGSC0003DMG401027859]
Coordinates
chr4:-:69413373..69418365
Molecular Weight (calculated)
63263.2 Da
IEP (calculated)
9.147
GRAVY (calculated)
-1.083
Length
563 amino acids
Sequence
(BLAST)
(BLAST)
001: MERISQKEHI LVDYGPQRSF EGSPSDMDMD FNDVFGGPPR RFSVQEARTR HSFNDSVESE EDSAGVSRNS WNGFNEKPVF GEENANRRRN QGGDFYDDIF
101: KVEEKSYSSS PVRPLSPKIE AFGTSLPAQF SLPAKLTKAT DLPTFASGSH SPHKKREKEM KNDAPVFYRQ SPLSREGTVI GDDLRSMSES DERDIGGHLK
201: KSGENMEDSS SEYQFHFSIY KWAGKGVPML VSLKGGKHFK SKEKIKFEKC PSSNARMEKD NTDTSSPLGR NVNFSRDANF HSLSTRSKKP ESSDKANGIV
301: GETLGIPKSK SVQSFKDDVG IQIEITKNSE ETKKQELKPL RAFLVDVADE KGDIKMAQET ERKSNTVKAT QAAKTNVKVK ENVKKIDDEA DKKLKKDDVE
401: VSENTQKRDS QAKRKGKRGS DKKTVVDTGE NRSSQPSSPI RSAENSTKAG IKGKVQDFVK MFNHEVDKNL NKQEKTTKYS QRKTEIPRTK DYSDQKAAPS
501: INESRRDDRK VSVGSMDDLF GGNYVVEELF EDQDTASQTN GKSEDSQVTY FFFLSNSVAF EHP
101: KVEEKSYSSS PVRPLSPKIE AFGTSLPAQF SLPAKLTKAT DLPTFASGSH SPHKKREKEM KNDAPVFYRQ SPLSREGTVI GDDLRSMSES DERDIGGHLK
201: KSGENMEDSS SEYQFHFSIY KWAGKGVPML VSLKGGKHFK SKEKIKFEKC PSSNARMEKD NTDTSSPLGR NVNFSRDANF HSLSTRSKKP ESSDKANGIV
301: GETLGIPKSK SVQSFKDDVG IQIEITKNSE ETKKQELKPL RAFLVDVADE KGDIKMAQET ERKSNTVKAT QAAKTNVKVK ENVKKIDDEA DKKLKKDDVE
401: VSENTQKRDS QAKRKGKRGS DKKTVVDTGE NRSSQPSSPI RSAENSTKAG IKGKVQDFVK MFNHEVDKNL NKQEKTTKYS QRKTEIPRTK DYSDQKAAPS
501: INESRRDDRK VSVGSMDDLF GGNYVVEELF EDQDTASQTN GKSEDSQVTY FFFLSNSVAF EHP
001: MQTLPSSETV LLGSNSAPPV LRSPGGDDVD IDFGDVFGGP PKRRSKVTSN EVTRHSFSES ALRRRDVIVD VGDLLPQDEK PVFGEDTSSV RRRFTTDDFF
101: DDIFRVNESS SLPGSRILSP AHKPESSSGT SSPSQFSLPA KATEIPTFNL AATRSLNKNK ETVSSSPLSR TSSKADVVST AKSYSDDCDD PPQVFVTGKG
201: RQFHFSIYKW PNKGVPVVIW GSSRLSSMSK AEETTPVPLS DYRKTSVVEK LGKNEEGDGK SGLSGLKDVK KTSLKRPGVQ TKEEKTETDL KSEQAFFGVS
301: KAREANVKPL DSVESEQAFS GVSKAHEATT VKPLHSIFHE EDERQDEKIV SEREVRKGKS KAKNTRSFTE DSRTKKKSQG TKSSLDSSPI PDKSSFASSS
401: AAPEVGKDGV KGKVSDFVKI FSKGASVGAG GESLGQSSRW RAKETPKTDI IHDGSNAKET VNIPDQQKKS TPDIPAMNRD QKPSQSTQKK DSDRESMNYK
501: APGDTVQEER QEPSTTHTTS EDIDEPFHVN FDVEDITQDE NKMEEANKDA EEIKNIDAKI RKWSSGKSGN IRSLLSTLQY ILWSGSGWKP VPLMDMIEGN
601: AVRKSYQRAL LILHPDKLQQ KGASANQKYM AEKVFELLQE AWDHFNTLGP V
101: DDIFRVNESS SLPGSRILSP AHKPESSSGT SSPSQFSLPA KATEIPTFNL AATRSLNKNK ETVSSSPLSR TSSKADVVST AKSYSDDCDD PPQVFVTGKG
201: RQFHFSIYKW PNKGVPVVIW GSSRLSSMSK AEETTPVPLS DYRKTSVVEK LGKNEEGDGK SGLSGLKDVK KTSLKRPGVQ TKEEKTETDL KSEQAFFGVS
301: KAREANVKPL DSVESEQAFS GVSKAHEATT VKPLHSIFHE EDERQDEKIV SEREVRKGKS KAKNTRSFTE DSRTKKKSQG TKSSLDSSPI PDKSSFASSS
401: AAPEVGKDGV KGKVSDFVKI FSKGASVGAG GESLGQSSRW RAKETPKTDI IHDGSNAKET VNIPDQQKKS TPDIPAMNRD QKPSQSTQKK DSDRESMNYK
501: APGDTVQEER QEPSTTHTTS EDIDEPFHVN FDVEDITQDE NKMEEANKDA EEIKNIDAKI RKWSSGKSGN IRSLLSTLQY ILWSGSGWKP VPLMDMIEGN
601: AVRKSYQRAL LILHPDKLQQ KGASANQKYM AEKVFELLQE AWDHFNTLGP V
Arabidopsis Description
JAC1JAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.