Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45410 | Canola | nucleus | 65.75 | 72.05 |
| CDX73142 | Canola | nucleus | 64.36 | 70.78 |
| Bra015866.1-P | Field mustard | nucleus | 67.74 | 69.12 |
| CDY59467 | Canola | mitochondrion | 62.06 | 40.85 |
| KRH61195 | Soybean | nucleus | 30.72 | 31.6 |
| PGSC0003DMT400071608 | Potato | nucleus | 31.64 | 29.51 |
| Solyc04g080040.2.1 | Tomato | nucleus | 31.95 | 28.73 |
| VIT_18s0001g12100.t01 | Wine grape | nucleus | 33.64 | 28.59 |
| KRH51877 | Soybean | nucleus | 30.57 | 27.64 |
| Os03t0198300-02 | Rice | nucleus | 25.5 | 27.35 |
| GSMUA_Achr7P25970_001 | Banana | nucleus | 27.8 | 26.19 |
| Zm00001d048175_P002 | Maize | nucleus | 23.04 | 25.17 |
| EER95331 | Sorghum | nucleus, plastid | 22.43 | 24.79 |
| TraesCS4A01G041000.2 | Wheat | nucleus, plastid | 23.66 | 24.25 |
| TraesCS4B01G261900.1 | Wheat | nucleus, plastid | 23.5 | 23.98 |
| TraesCS4D01G261900.1 | Wheat | nucleus, plastid | 23.5 | 23.79 |
| PGSC0003DMT400071606 | Potato | nucleus | 20.28 | 23.45 |
| HORVU4Hr1G070720.5 | Barley | mitochondrion | 23.81 | 22.83 |
| AT1G30280.1 | Thale cress | cytosol | 13.06 | 18.68 |
| AT1G21660.1 | Thale cress | nucleus | 11.06 | 13.77 |
| AT4G12770.1 | Thale cress | nucleus | 14.9 | 10.89 |
| AT4G12780.1 | Thale cress | nucleus | 14.29 | 10.29 |
| AT4G36520.1 | Thale cress | nucleus, plastid | 16.13 | 7.38 |
| AT1G75310.2 | Thale cress | nucleus | 14.29 | 6.41 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:20.5.7 | MapMan:22.1.6.4 | PDB:3AG7 | EntrezGene:843847 | UniProt:A0A178WHU1 |
| ProteinID:AAG51921.1 | EMBL:AB158477 | ProteinID:AEE35672.1 | ArrayExpress:AT1G75100 | EnsemblPlantsGene:AT1G75100 | RefSeq:AT1G75100 |
| TAIR:AT1G75100 | RefSeq:AT1G75100-TAIR-G | EnsemblPlants:AT1G75100.1 | TAIR:AT1G75100.1 | EMBL:AY057504 | EMBL:AY103303 |
| ncoils:Coil | InterPro:DnaJ_domain | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006810 | GO:GO:0006898 | GO:GO:0007015 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009903 |
| GO:GO:0009904 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0031982 | GO:GO:0071483 | InterPro:IPR001623 |
| InterPro:IPR036869 | Symbol:JAC1 | InterPro:J_dom_sf | RefSeq:NP_565101.1 | ProteinID:OAP17938.1 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF55 |
| UniProt:Q9C9Q4 | SUPFAM:SSF46565 | UniParc:UPI00000A01C8 | SEG:seg | : | : |
Description
JAC1JAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHU1]
Coordinates
chr1:-:28190740..28194068
Molecular Weight (calculated)
71605.1 Da
IEP (calculated)
7.433
GRAVY (calculated)
-0.845
Length
651 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTLPSSETV LLGSNSAPPV LRSPGGDDVD IDFGDVFGGP PKRRSKVTSN EVTRHSFSES ALRRRDVIVD VGDLLPQDEK PVFGEDTSSV RRRFTTDDFF
101: DDIFRVNESS SLPGSRILSP AHKPESSSGT SSPSQFSLPA KATEIPTFNL AATRSLNKNK ETVSSSPLSR TSSKADVVST AKSYSDDCDD PPQVFVTGKG
201: RQFHFSIYKW PNKGVPVVIW GSSRLSSMSK AEETTPVPLS DYRKTSVVEK LGKNEEGDGK SGLSGLKDVK KTSLKRPGVQ TKEEKTETDL KSEQAFFGVS
301: KAREANVKPL DSVESEQAFS GVSKAHEATT VKPLHSIFHE EDERQDEKIV SEREVRKGKS KAKNTRSFTE DSRTKKKSQG TKSSLDSSPI PDKSSFASSS
401: AAPEVGKDGV KGKVSDFVKI FSKGASVGAG GESLGQSSRW RAKETPKTDI IHDGSNAKET VNIPDQQKKS TPDIPAMNRD QKPSQSTQKK DSDRESMNYK
501: APGDTVQEER QEPSTTHTTS EDIDEPFHVN FDVEDITQDE NKMEEANKDA EEIKNIDAKI RKWSSGKSGN IRSLLSTLQY ILWSGSGWKP VPLMDMIEGN
601: AVRKSYQRAL LILHPDKLQQ KGASANQKYM AEKVFELLQE AWDHFNTLGP V
101: DDIFRVNESS SLPGSRILSP AHKPESSSGT SSPSQFSLPA KATEIPTFNL AATRSLNKNK ETVSSSPLSR TSSKADVVST AKSYSDDCDD PPQVFVTGKG
201: RQFHFSIYKW PNKGVPVVIW GSSRLSSMSK AEETTPVPLS DYRKTSVVEK LGKNEEGDGK SGLSGLKDVK KTSLKRPGVQ TKEEKTETDL KSEQAFFGVS
301: KAREANVKPL DSVESEQAFS GVSKAHEATT VKPLHSIFHE EDERQDEKIV SEREVRKGKS KAKNTRSFTE DSRTKKKSQG TKSSLDSSPI PDKSSFASSS
401: AAPEVGKDGV KGKVSDFVKI FSKGASVGAG GESLGQSSRW RAKETPKTDI IHDGSNAKET VNIPDQQKKS TPDIPAMNRD QKPSQSTQKK DSDRESMNYK
501: APGDTVQEER QEPSTTHTTS EDIDEPFHVN FDVEDITQDE NKMEEANKDA EEIKNIDAKI RKWSSGKSGN IRSLLSTLQY ILWSGSGWKP VPLMDMIEGN
601: AVRKSYQRAL LILHPDKLQQ KGASANQKYM AEKVFELLQE AWDHFNTLGP V
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.