Factsheet for Bra015866.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75100.1	Bra000214.1-P	AT2G41090.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45410	Canola	nucleus	92.48	99.33
AT1G75100.1	Thale cress	nucleus	69.12	67.74
KRH61195	Soybean	nucleus	30.72	30.96
PGSC0003DMT400071608	Potato	nucleus	31.97	29.23
Solyc04g080040.2.1	Tomato	nucleus	31.82	28.04
VIT_18s0001g12100.t01	Wine grape	nucleus	32.6	27.15
Os03t0198300-02	Rice	nucleus	25.55	26.85
KRH51877	Soybean	nucleus	30.09	26.67
GSMUA_Achr7P25970_001	Banana	nucleus	28.06	25.9
EER95331	Sorghum	nucleus, plastid	23.35	25.3
TraesCS4B01G261900.1	Wheat	nucleus, plastid	25.08	25.08
TraesCS4A01G041000.2	Wheat	nucleus, plastid	24.92	25.04
Zm00001d048175_P002	Maize	nucleus	23.35	25.0
TraesCS4D01G261900.1	Wheat	nucleus, plastid	24.92	24.73
PGSC0003DMT400071606	Potato	nucleus	20.38	23.09
HORVU4Hr1G070720.5	Barley	mitochondrion	24.45	22.98
Bra015674.1-P	Field mustard	cytosol	10.19	21.38
Bra014876.1-P	Field mustard	nucleus	12.7	18.66
Bra010780.1-P	Field mustard	nucleus	12.23	18.66
Bra032375.1-P	Field mustard	cytosol	12.07	17.78
Bra017937.1-P	Field mustard	nucleus	11.44	14.99
Bra012290.1-P	Field mustard	cytosol	12.07	14.95
Bra020913.1-P	Field mustard	nucleus	14.58	11.12
Bra011688.1-P	Field mustard	nucleus	12.85	6.55
Bra015852.1-P	Field mustard	nucleus	15.2	6.53

Protein Annotations

Gene3D:1.10.287.110	MapMan:20.5.7	MapMan:22.1.6.4	EnsemblPlantsGene:Bra015866	EnsemblPlants:Bra015866.1	EnsemblPlants:Bra015866.1-P
ncoils:Coil	InterPro:DnaJ_domain	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0007015	GO:GO:0008150	GO:GO:0009628	GO:GO:0009903	GO:GO:0009904	GO:GO:0009987
GO:GO:0016043	GO:GO:0071483	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4DH89
PANTHER:PTHR23172	PANTHER:PTHR23172:SF55	SUPFAM:SSF46565	UniParc:UPI0002541F03	SEG:seg	:

Description

AT1G75100 (E=6e-078) JAC1 | JAC1 (J-DOMAIN PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1); heat shock protein binding

Coordinates

chrA07:-:20439121..20442056

Molecular Weight (calculated)

70340.4 Da

IEP (calculated)

8.002

GRAVY (calculated)

-0.743

Length

638 amino acids

Sequence
(BLAST)

001: MQTLPNSPPL LRHPAGDDDV DIDFRDVFGG PPKRRSKVIE TTGRHSFSEI RRRDVIVDNS ALILRDEKPV FGEDPSSIRR RFTADDFFDD IFRVNESSSS
101: SSPQRKVKNE GETFGSSLPG SRILSPARPI PHKVESPPGT SFPAQFSLPA KLIKGTEMPT FGSAARSLSR NKEAASSSPL SRTSSSADMV NSTAKPDSDG
201: YVAPKVVNGK VRQFHFSIYK WPNKGVPVAM WGTSRLSSMA KAEETTPSDL RPTSVEAEGQ SSQNRPGVQK EEEMSEQAFS SNVSKAPDEA NVKPQHSFLD
301: VKDERQGEEI ELEKEERKGK SKAKSMRSHA GDSRSKKKAQ GSRSSVDSPM PDNTSSYASA SSAPEVGKDG AKGKVMDFVK IFSQGASAGA GGEPLGQSSR
401: WRAKEVPVTD TNKDDAKAKE TAKVPDQQKT STPVTPAMVC GFVNQDLPIY MFYCVLWFLT PCLRILMQDQ DQKPSQATQK KVADSSKPSG VTEQEEKQEP
501: STAHVTSEAI DEPFHVNFLV EDITQDENKM EETKNNAEEF QNIDAKIRKW SSGKSGNIRS LLSTLQYILW PGCGWKAVPL MDMIEGNAVR KSYQRALLIL
601: HPDKLQQKGA SANQKYMAEK VFELLQEAWD HFNTLGPV

Best Arabidopsis Sequence Match ( AT1G75100.1 )
(BLAST)

001: MQTLPSSETV LLGSNSAPPV LRSPGGDDVD IDFGDVFGGP PKRRSKVTSN EVTRHSFSES ALRRRDVIVD VGDLLPQDEK PVFGEDTSSV RRRFTTDDFF
101: DDIFRVNESS SLPGSRILSP AHKPESSSGT SSPSQFSLPA KATEIPTFNL AATRSLNKNK ETVSSSPLSR TSSKADVVST AKSYSDDCDD PPQVFVTGKG
201: RQFHFSIYKW PNKGVPVVIW GSSRLSSMSK AEETTPVPLS DYRKTSVVEK LGKNEEGDGK SGLSGLKDVK KTSLKRPGVQ TKEEKTETDL KSEQAFFGVS
301: KAREANVKPL DSVESEQAFS GVSKAHEATT VKPLHSIFHE EDERQDEKIV SEREVRKGKS KAKNTRSFTE DSRTKKKSQG TKSSLDSSPI PDKSSFASSS
401: AAPEVGKDGV KGKVSDFVKI FSKGASVGAG GESLGQSSRW RAKETPKTDI IHDGSNAKET VNIPDQQKKS TPDIPAMNRD QKPSQSTQKK DSDRESMNYK
501: APGDTVQEER QEPSTTHTTS EDIDEPFHVN FDVEDITQDE NKMEEANKDA EEIKNIDAKI RKWSSGKSGN IRSLLSTLQY ILWSGSGWKP VPLMDMIEGN
601: AVRKSYQRAL LILHPDKLQQ KGASANQKYM AEKVFELLQE AWDHFNTLGP V

Arabidopsis Description

JAC1JAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHU1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.