Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08188 | Canola | nucleus | 99.18 | 99.18 |
| Bra012290.1-P | Field mustard | cytosol | 75.56 | 71.46 |
| AT1G21660.1 | Thale cress | nucleus | 74.13 | 69.02 |
| KRG89681 | Soybean | extracellular, golgi | 11.29 | 65.48 |
| Bra015674.1-P | Field mustard | cytosol | 33.68 | 53.95 |
| PGSC0003DMT400030755 | Potato | nucleus | 21.15 | 53.09 |
| KRH64620 | Soybean | nucleus | 42.51 | 40.04 |
| KRH53284 | Soybean | nucleus | 42.09 | 39.73 |
| VIT_18s0001g01980.t01 | Wine grape | cytosol | 38.6 | 36.43 |
| Solyc06g060090.2.1 | Tomato | nucleus | 35.73 | 35.73 |
| Bra020913.1-P | Field mustard | nucleus | 40.45 | 23.56 |
| Os01t0355500-02 | Rice | nucleus | 37.58 | 19.3 |
| OQU86832 | Sorghum | nucleus | 36.55 | 18.56 |
| Bra010780.1-P | Field mustard | nucleus | 13.55 | 15.79 |
| Zm00001d040795_P002 | Maize | cytosol | 28.95 | 15.34 |
| Bra032375.1-P | Field mustard | cytosol | 13.14 | 14.78 |
| Bra014876.1-P | Field mustard | nucleus | 13.14 | 14.75 |
| Bra015866.1-P | Field mustard | nucleus | 14.99 | 11.44 |
| Bra011688.1-P | Field mustard | nucleus | 25.87 | 10.06 |
| Bra015852.1-P | Field mustard | nucleus | 23.0 | 7.54 |
Protein Annotations
Description
AT1G21660 (E=4e-131) | heat shock protein binding
Coordinates
chrA06:+:8946258..8948751
Molecular Weight (calculated)
52651.8 Da
IEP (calculated)
7.810
GRAVY (calculated)
-0.645
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEFGVLTER YGIKPQGKSA PMAASKRSHN TPNWKSYASS SSSNKVSGNG DDIFFTSSST TTTMNGASSG DFDVFGGMNN KNSKSSSSAH ADDLFGAMPT
101: APNNDDDIFG SFSSSTNQYP PVDDLLAGFG ALKSQTFNLN NSSASDELIP GFGFATSHSK TTASNFVDTD PFVVLESTMS GAHSSSGIFV DPLDAFAASV
201: SSQGQKPSNN TTHSSTKLKP PPKPTQKVNR AKSSVMSSVD ELDDFAMGGT MRRSASASDA ASKYREAQET KQFGVDDLDS FFSSGPRSSS VPKSRTATEA
301: PRKPAVNVPK KTTNGVSSAK KPPAPAANLV DDFSALFGED PPIFKEFEEI PGETEERRKA RWDREQRTKS RVAQAVADMN NRDHQSRIEQ EQRTRISETA
401: DAEIKRWATG KEGNMRALLS SLQIVLWPGC GWEAVSLTDL ITSSAVKKVY RKATLYVHPD KVQQKGATLE QKYIAEKVFD ILKVFSH
101: APNNDDDIFG SFSSSTNQYP PVDDLLAGFG ALKSQTFNLN NSSASDELIP GFGFATSHSK TTASNFVDTD PFVVLESTMS GAHSSSGIFV DPLDAFAASV
201: SSQGQKPSNN TTHSSTKLKP PPKPTQKVNR AKSSVMSSVD ELDDFAMGGT MRRSASASDA ASKYREAQET KQFGVDDLDS FFSSGPRSSS VPKSRTATEA
301: PRKPAVNVPK KTTNGVSSAK KPPAPAANLV DDFSALFGED PPIFKEFEEI PGETEERRKA RWDREQRTKS RVAQAVADMN NRDHQSRIEQ EQRTRISETA
401: DAEIKRWATG KEGNMRALLS SLQIVLWPGC GWEAVSLTDL ITSSAVKKVY RKATLYVHPD KVQQKGATLE QKYIAEKVFD ILKVFSH
001: MDEFGVLTER YGIKPQGKSA PMAASKRNPN NNGQSWNFGT GSSGLNAKST SFSSNSSWNK DSTNGSLFDG DDIFFPANST NRKVSNDFDV FAGLNKSSSS
101: GDNSKSSLND DLFFSNFGNP GKTTPSSADD LFGGVIPGSK SSDSVKNDDL FGSFSSSEKQ YAAAVDDLLG LGKNEAGYDG LIPGFGGSTQ TTSSKTTPSN
201: FDATDPFVVL ESTTSTGLFV DPLEEFAATV SSQGIKPSNT SHTSTKLKPP PKPTQKVNRG KSVGMSSIDE LEDFAMGTMR RSASASDTAS KYREAEDAAT
301: KNKQFGVDDL DSFFSARSSS VPKSRTTTET TRKQASNAPK KTPNGVSNAK KPPAPANLVD DFSALFGEDP IFRQFEEIPG ESEERRKARW DREQRTKSRV
401: AQAVADMNNR DHQSRIEQEQ RTRISETVDT EIRRWATGKE GNMRALLSSL HIVLWPGCGW EAVSITDLIT SSAVKKVYRK ATLYVHPDKV QQKGATLEQK
501: YIAEKVFDIL KEAWNKFNKE ELS
101: GDNSKSSLND DLFFSNFGNP GKTTPSSADD LFGGVIPGSK SSDSVKNDDL FGSFSSSEKQ YAAAVDDLLG LGKNEAGYDG LIPGFGGSTQ TTSSKTTPSN
201: FDATDPFVVL ESTTSTGLFV DPLEEFAATV SSQGIKPSNT SHTSTKLKPP PKPTQKVNRG KSVGMSSIDE LEDFAMGTMR RSASASDTAS KYREAEDAAT
301: KNKQFGVDDL DSFFSARSSS VPKSRTTTET TRKQASNAPK KTPNGVSNAK KPPAPANLVD DFSALFGEDP IFRQFEEIPG ESEERRKARW DREQRTKSRV
401: AQAVADMNNR DHQSRIEQEQ RTRISETVDT EIRRWATGKE GNMRALLSSL HIVLWPGCGW EAVSITDLIT SSAVKKVYRK ATLYVHPDKV QQKGATLEQK
501: YIAEKVFDIL KEAWNKFNKE ELS
Arabidopsis Description
At1g21660 [Source:UniProtKB/TrEMBL;Acc:Q9XI12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.