Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH53284 | Soybean | nucleus | 93.42 | 93.6 |
| KRG89681 | Soybean | extracellular, golgi | 14.51 | 89.29 |
| PGSC0003DMT400030755 | Potato | nucleus | 22.24 | 59.28 |
| CDX88363 | Canola | cytosol | 23.79 | 51.46 |
| CDY04660 | Canola | cytosol | 41.39 | 44.68 |
| CDX87523 | Canola | cytosol | 26.31 | 44.44 |
| Bra015674.1-P | Field mustard | cytosol | 26.11 | 44.41 |
| CDY01318 | Canola | cytosol | 42.36 | 42.61 |
| CDY00396 | Canola | nucleus | 43.13 | 42.56 |
| Bra017937.1-P | Field mustard | nucleus | 40.04 | 42.51 |
| CDY08188 | Canola | nucleus | 39.85 | 42.3 |
| Bra012290.1-P | Field mustard | cytosol | 41.97 | 42.14 |
| AT1G21660.1 | Thale cress | nucleus | 42.17 | 41.68 |
| VIT_18s0001g01980.t01 | Wine grape | cytosol | 40.04 | 40.12 |
| Solyc06g060090.2.1 | Tomato | nucleus | 34.04 | 36.14 |
| KRH53945 | Soybean | nucleus, plastid | 46.62 | 26.14 |
| KRH63993 | Soybean | nucleus, plastid | 46.03 | 26.1 |
| KRH40961 | Soybean | endoplasmic reticulum | 46.42 | 25.7 |
| KRH59609 | Soybean | nucleus | 46.62 | 24.52 |
| Os01t0355500-02 | Rice | nucleus | 39.07 | 21.31 |
| OQU86832 | Sorghum | nucleus | 39.07 | 21.06 |
| KRH12827 | Soybean | nucleus | 16.83 | 18.67 |
| KRH37791 | Soybean | nucleus | 16.83 | 18.59 |
| Zm00001d040795_P002 | Maize | cytosol | 30.17 | 16.98 |
| KRH58698 | Soybean | nucleus | 15.09 | 16.77 |
| KRH42596 | Soybean | nucleus | 15.09 | 16.39 |
| KRH44795 | Soybean | nucleus | 14.12 | 16.11 |
| KRH61195 | Soybean | nucleus | 16.25 | 13.27 |
| KRH51877 | Soybean | nucleus | 16.83 | 12.08 |
| KRH28713 | Soybean | nucleus | 23.6 | 8.79 |
| KRH70946 | Soybean | nucleus | 22.44 | 8.75 |
| KRH75084 | Soybean | nucleus | 22.44 | 8.67 |
| KRH76753 | Soybean | nucleus | 23.4 | 8.62 |
| KRH69887 | Soybean | nucleus | 23.79 | 8.54 |
| KRH08235 | Soybean | nucleus | 4.45 | 2.87 |
Protein Annotations
| EMBL:ACUP02002770 | EnsemblPlants:KRH64620 | EnsemblPlantsGene:GLYMA_04G246200 | EntrezGene:100779375 | Gene3D:1.10.287.110 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006898 | GO:GO:0008150 | GO:GO:0031982 | InterPro:IPR036869 | InterPro:J_dom_sf |
| PANTHER:PTHR23172 | PANTHER:PTHR23172:SF51 | ProteinID:KRH64620 | ProteinID:KRH64620.1 | SEG:seg | SUPFAM:SSF46565 |
| UniParc:UPI000233A4FE | UniProt:K7KM58 | MapMan:22.1.6.4 | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:51376290..51382034
Molecular Weight (calculated)
56619.9 Da
IEP (calculated)
9.296
GRAVY (calculated)
-0.772
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEFGVLTER FGLKPQGKSA PMARAKRPPN VADSQTRPNS KSPLNGSPSH QNSTFDFDYG FFSSSNNSNT DNKTQRFDDI FGVDAKSNGA SFDYDSIFSG
101: SNKPVSASSY VDDIFGGMHE KSVGVDDLLD KIGGLNTNAK SPNTKTPAFD YLIPGFGVSN NGVEMNKQSV TPNKPAAAAS QDDPFLIFET ASSSASSESF
201: LNALEQISRS NNSKGTKGGS PSLKSPPKPM SKVNRPSVST IDELEDFAMG GAQTNASSRK ANVNAAETKQ NLAARMNNGK RVPAARVNQA NGVDDLESFF
301: SMGSRSSSVP KSRTPTMDHM YDNQMKNKER PEVSPRVPSR SSASVNKSPV MTSLDDLSLM FGGSPSSEFQ EVEGETEERR KARLGRHQRA QERALKAVND
401: MNQRDLQTKM EQEERRKIAD TADVQIKRWA AGKEGNMRAL LSTLQYVLWP ECGWQPVSLT DMITSSAVKK VYRKANLCIH PDKVQQKGAT LEQKYTAEKV
501: FDILKEAYTK FNAEELS
101: SNKPVSASSY VDDIFGGMHE KSVGVDDLLD KIGGLNTNAK SPNTKTPAFD YLIPGFGVSN NGVEMNKQSV TPNKPAAAAS QDDPFLIFET ASSSASSESF
201: LNALEQISRS NNSKGTKGGS PSLKSPPKPM SKVNRPSVST IDELEDFAMG GAQTNASSRK ANVNAAETKQ NLAARMNNGK RVPAARVNQA NGVDDLESFF
301: SMGSRSSSVP KSRTPTMDHM YDNQMKNKER PEVSPRVPSR SSASVNKSPV MTSLDDLSLM FGGSPSSEFQ EVEGETEERR KARLGRHQRA QERALKAVND
401: MNQRDLQTKM EQEERRKIAD TADVQIKRWA AGKEGNMRAL LSTLQYVLWP ECGWQPVSLT DMITSSAVKK VYRKANLCIH PDKVQQKGAT LEQKYTAEKV
501: FDILKEAYTK FNAEELS
001: MDEFGVLTER YGIKPQGKSA PMAASKRNPN NNGQSWNFGT GSSGLNAKST SFSSNSSWNK DSTNGSLFDG DDIFFPANST NRKVSNDFDV FAGLNKSSSS
101: GDNSKSSLND DLFFSNFGNP GKTTPSSADD LFGGVIPGSK SSDSVKNDDL FGSFSSSEKQ YAAAVDDLLG LGKNEAGYDG LIPGFGGSTQ TTSSKTTPSN
201: FDATDPFVVL ESTTSTGLFV DPLEEFAATV SSQGIKPSNT SHTSTKLKPP PKPTQKVNRG KSVGMSSIDE LEDFAMGTMR RSASASDTAS KYREAEDAAT
301: KNKQFGVDDL DSFFSARSSS VPKSRTTTET TRKQASNAPK KTPNGVSNAK KPPAPANLVD DFSALFGEDP IFRQFEEIPG ESEERRKARW DREQRTKSRV
401: AQAVADMNNR DHQSRIEQEQ RTRISETVDT EIRRWATGKE GNMRALLSSL HIVLWPGCGW EAVSITDLIT SSAVKKVYRK ATLYVHPDKV QQKGATLEQK
501: YIAEKVFDIL KEAWNKFNKE ELS
101: GDNSKSSLND DLFFSNFGNP GKTTPSSADD LFGGVIPGSK SSDSVKNDDL FGSFSSSEKQ YAAAVDDLLG LGKNEAGYDG LIPGFGGSTQ TTSSKTTPSN
201: FDATDPFVVL ESTTSTGLFV DPLEEFAATV SSQGIKPSNT SHTSTKLKPP PKPTQKVNRG KSVGMSSIDE LEDFAMGTMR RSASASDTAS KYREAEDAAT
301: KNKQFGVDDL DSFFSARSSS VPKSRTTTET TRKQASNAPK KTPNGVSNAK KPPAPANLVD DFSALFGEDP IFRQFEEIPG ESEERRKARW DREQRTKSRV
401: AQAVADMNNR DHQSRIEQEQ RTRISETVDT EIRRWATGKE GNMRALLSSL HIVLWPGCGW EAVSITDLIT SSAVKKVYRK ATLYVHPDKV QQKGATLEQK
501: YIAEKVFDIL KEAWNKFNKE ELS
Arabidopsis Description
At1g21660 [Source:UniProtKB/TrEMBL;Acc:Q9XI12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.