Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012290.1-P | Field mustard | cytosol | 97.47 | 97.28 |
| CDY00396 | Canola | nucleus | 90.27 | 88.55 |
| CDY04660 | Canola | cytosol | 73.15 | 78.5 |
| KRG89681 | Soybean | extracellular, golgi | 12.65 | 77.38 |
| CDY08188 | Canola | nucleus | 72.37 | 76.39 |
| AT1G21660.1 | Thale cress | nucleus | 76.46 | 75.14 |
| CDX88363 | Canola | cytosol | 30.35 | 65.27 |
| CDX87523 | Canola | cytosol | 34.05 | 57.19 |
| PGSC0003DMT400030755 | Potato | nucleus | 21.4 | 56.7 |
| KRH64620 | Soybean | nucleus | 42.61 | 42.36 |
| KRH53284 | Soybean | nucleus | 42.22 | 42.05 |
| VIT_18s0001g01980.t01 | Wine grape | cytosol | 38.72 | 38.57 |
| Solyc06g060090.2.1 | Tomato | nucleus | 35.21 | 37.17 |
| CDY31429 | Canola | plastid | 39.11 | 24.63 |
| CDX76445 | Canola | nucleus | 39.49 | 24.34 |
| Os01t0355500-02 | Rice | nucleus | 39.69 | 21.52 |
| OQU86832 | Sorghum | nucleus | 38.13 | 20.44 |
| Zm00001d040795_P002 | Maize | cytosol | 28.79 | 16.1 |
| CDX90242 | Canola | nucleus | 12.45 | 15.31 |
| CDY54130 | Canola | cytosol | 8.17 | 15.05 |
| CDX77599 | Canola | nucleus | 12.65 | 14.94 |
| CDY70725 | Canola | nucleus | 12.45 | 14.88 |
| CDX98192 | Canola | nucleus | 12.45 | 14.85 |
| CDY26275 | Canola | cytosol | 12.26 | 14.55 |
| CDY45410 | Canola | nucleus | 14.01 | 12.12 |
| CDX73142 | Canola | nucleus | 13.62 | 11.82 |
| CDX75581 | Canola | nucleus | 24.51 | 10.49 |
| CDX69230 | Canola | nucleus | 24.32 | 10.25 |
| CDY21468 | Canola | cytosol | 6.42 | 9.65 |
| CDX73162 | Canola | nucleus | 23.15 | 8.59 |
| CDY45424 | Canola | nucleus | 22.96 | 8.22 |
| CDY59467 | Canola | mitochondrion | 13.62 | 7.08 |
Protein Annotations
| EnsemblPlants:CDY01318 | EnsemblPlantsGene:GSBRNA2T00112269001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF51 | PFscan:PS50076 | ProteinID:CDY01318 | ProteinID:CDY01318.1 |
| SEG:seg | SUPFAM:SSF46565 | UniParc:UPI0004EEA6BD | MapMan:22.1.6.4 | : | : |
Description
BnaA07g10910D
Coordinates
chrLK031926:-:171055..174095
Molecular Weight (calculated)
55405.1 Da
IEP (calculated)
6.836
GRAVY (calculated)
-0.661
Length
514 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEFGVLTER YGIKPQGKSA PMAASKRPPT TTPQSLNNLG GVNPKSTSYS SNKVSVNDDF DVFGGGLNKP TNTKSSSLND DDLMFSNNFG MKTSSSSARG
101: FDDVDLFGAV PVSVGVGNDD IFGAFSSSTK QDAAGVDDLL GDMGGFGLES KTWNQSSSGK NGFDELIPGF GGSSQTTSSK TSASSNFADA DPFVVLESTT
201: SAARSSSGLF VDPLDEFAAS VSSQGKKPSN TKLKPPPKPT QKVDRVKSSG LSSIDELEDF AMGSSTMRRS ASASDTASKF REAEDAGTKK QQFGADDLDS
301: FFSSGHRSSS VPKSRATTEA TRKQAAVNVP KKTPNGVSSA KKPPAPANLV DDFSALFGGD PIFREFEEIP GESDERRKAR WDREQRTKSR VAQAVADMNN
401: RDHQSRIEQE QRTRISEGVD AEIRRWATGK EGNMRALLSS LQIVLWPGCG WEAVSLTDLI TSSAVKKVYR KATLYVHPDK VQQKGATLEQ KYIAEKVFDI
501: LKEAWNKFNK EELS
101: FDDVDLFGAV PVSVGVGNDD IFGAFSSSTK QDAAGVDDLL GDMGGFGLES KTWNQSSSGK NGFDELIPGF GGSSQTTSSK TSASSNFADA DPFVVLESTT
201: SAARSSSGLF VDPLDEFAAS VSSQGKKPSN TKLKPPPKPT QKVDRVKSSG LSSIDELEDF AMGSSTMRRS ASASDTASKF REAEDAGTKK QQFGADDLDS
301: FFSSGHRSSS VPKSRATTEA TRKQAAVNVP KKTPNGVSSA KKPPAPANLV DDFSALFGGD PIFREFEEIP GESDERRKAR WDREQRTKSR VAQAVADMNN
401: RDHQSRIEQE QRTRISEGVD AEIRRWATGK EGNMRALLSS LQIVLWPGCG WEAVSLTDLI TSSAVKKVYR KATLYVHPDK VQQKGATLEQ KYIAEKVFDI
501: LKEAWNKFNK EELS
001: MDEFGVLTER YGIKPQGKSA PMAASKRNPN NNGQSWNFGT GSSGLNAKST SFSSNSSWNK DSTNGSLFDG DDIFFPANST NRKVSNDFDV FAGLNKSSSS
101: GDNSKSSLND DLFFSNFGNP GKTTPSSADD LFGGVIPGSK SSDSVKNDDL FGSFSSSEKQ YAAAVDDLLG LGKNEAGYDG LIPGFGGSTQ TTSSKTTPSN
201: FDATDPFVVL ESTTSTGLFV DPLEEFAATV SSQGIKPSNT SHTSTKLKPP PKPTQKVNRG KSVGMSSIDE LEDFAMGTMR RSASASDTAS KYREAEDAAT
301: KNKQFGVDDL DSFFSARSSS VPKSRTTTET TRKQASNAPK KTPNGVSNAK KPPAPANLVD DFSALFGEDP IFRQFEEIPG ESEERRKARW DREQRTKSRV
401: AQAVADMNNR DHQSRIEQEQ RTRISETVDT EIRRWATGKE GNMRALLSSL HIVLWPGCGW EAVSITDLIT SSAVKKVYRK ATLYVHPDKV QQKGATLEQK
501: YIAEKVFDIL KEAWNKFNKE ELS
101: GDNSKSSLND DLFFSNFGNP GKTTPSSADD LFGGVIPGSK SSDSVKNDDL FGSFSSSEKQ YAAAVDDLLG LGKNEAGYDG LIPGFGGSTQ TTSSKTTPSN
201: FDATDPFVVL ESTTSTGLFV DPLEEFAATV SSQGIKPSNT SHTSTKLKPP PKPTQKVNRG KSVGMSSIDE LEDFAMGTMR RSASASDTAS KYREAEDAAT
301: KNKQFGVDDL DSFFSARSSS VPKSRTTTET TRKQASNAPK KTPNGVSNAK KPPAPANLVD DFSALFGEDP IFRQFEEIPG ESEERRKARW DREQRTKSRV
401: AQAVADMNNR DHQSRIEQEQ RTRISETVDT EIRRWATGKE GNMRALLSSL HIVLWPGCGW EAVSITDLIT SSAVKKVYRK ATLYVHPDKV QQKGATLEQK
501: YIAEKVFDIL KEAWNKFNKE ELS
Arabidopsis Description
At1g21660 [Source:UniProtKB/TrEMBL;Acc:Q9XI12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.