CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010780.1-P	Field mustard	nucleus	99.52	99.52
CDY70725	Canola	nucleus	94.98	92.33
CDX77599	Canola	nucleus	85.41	82.07
CDX98192	Canola	nucleus	84.21	81.67
CDY26275	Canola	cytosol	80.86	78.06
AT1G30280.1	Thale cress	cytosol	84.93	78.02
CDY54130	Canola	cytosol	49.28	73.84
CDY21468	Canola	cytosol	59.81	73.1
KRH37791	Soybean	nucleus	45.22	40.38
KRH12827	Soybean	nucleus	44.26	39.7
VIT_10s0003g04050.t01	Wine grape	nucleus	45.69	39.3
KRH58698	Soybean	nucleus	43.54	39.14
KRH44795	Soybean	nucleus	41.63	38.41
KRH42596	Soybean	nucleus	42.34	37.18
CDX88363	Canola	cytosol	13.4	23.43
CDX87523	Canola	cytosol	13.16	17.97
CDY04660	Canola	cytosol	16.75	14.61
CDY08188	Canola	nucleus	15.79	13.55
CDY00396	Canola	nucleus	16.27	12.98
CDY45410	Canola	nucleus	17.7	12.46
CDY01318	Canola	cytosol	15.31	12.45
CDX73142	Canola	nucleus	17.46	12.33
CDX76445	Canola	nucleus	20.81	10.43
CDY31429	Canola	plastid	20.33	10.42
CDY59467	Canola	mitochondrion	18.42	7.79
CDX69230	Canola	nucleus	21.29	7.3
CDX75581	Canola	nucleus	20.81	7.24
CDX73162	Canola	nucleus	21.05	6.35
CDY45424	Canola	nucleus	20.57	5.99

Protein Annotations

EnsemblPlants:CDX90242	EnsemblPlantsGene:GSBRNA2T00150807001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PANTHER:PTHR23172	PANTHER:PTHR23172:SF39	ProteinID:CDX90242	ProteinID:CDX90242.1	SEG:seg
SUPFAM:SSF46565	UniParc:UPI0004EE66D8	MapMan:22.1.6.4	:	:	:

Description

BnaA08g17420D

Coordinates

chrLK031862:-:831945..833551

Molecular Weight (calculated)

46807.7 Da

IEP (calculated)

5.015

GRAVY (calculated)

-0.832

Length

418 amino acids

Sequence
(BLAST)

001: MDESWRKKMG LNVDPFFSVA RRSMDARIDA EDFADVFGGP PRSFLTRKFS GDFSRSDCFY DEVFLPPGIS SGGSLPSSKS HGRNLTAFRI PSGADGFYDG
101: VFGGRGGAAK KQSPTAKSNS SSVLTSEEVS PHYPPPAATS GDDAGFSSFT SRLRPLNVPS RKRESKKQSF PAFPTSGDSF SGHERSDFYY RKPHFSGSRR
201: SSPETMSFDP SSFRRIDDFG PSSPASSPVS SFVYEEENTE RKGDCNVDEV EEEEMSSYVI EINSDRFDRG NSDSNDMDEA IAWAKERSQR PEAKQTQEED
301: LMDSRSEEAK SEEEMEMEMK DEEIRIWLTG KETNIRLLLS TLHHVLWSDS NWHEIPLENL RDGSQVKKAY QKARLCLHPD KLQQRGGTSP VQKSVASRVF
401: SILQEAWAVY VTNEGLSS

Best Arabidopsis Sequence Match ( AT1G30280.1 )
(BLAST)

001: MDESWRMKMG LSVDPFFSIA RKSMDARIDA EDFADVFGGP PRSVLTRKFS GDFSRSDCFY DEIFQPPGTF SSGGSLASSK SHGRNLPAFR IPSGGEGFYD
101: GVFGGRGGSA KEGSKKQSSM TKPRSNSSSM LSSEEASPHY PPPAAASGDD SGFSSFTSRL RPLNVPSRSH KRESKKQSFS AVPKAKDSFS GQNNTPEKAD
201: FYYKKTHFGG SRRASPETIS LDPNSFRRMD DYGPSSPASS PVSSFICEEE DDNTHAKQRT NRDCKVEEVV VEDEEDEEEE EMSSYVIEIN SDRFDRYREE
301: GGGGGGNSDS NDMDEAIAWA KERSQRPEAK QTEEDVIDSR RSEEEPKSEE EMEMEMKDEE IRIWLTGKET NIRLLLSTLH HVLWSNSNWD SIPLANLRDG
401: SQVKKAYQRA RLCLHPDKLQ QRGGTSPIQK SVASRVFAIL QEAWAVYVTN EGLSS

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C752]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.