CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44795	Soybean	nucleus	91.39	96.03
KRH58698	Soybean	nucleus	92.44	94.62
KRH12827	Soybean	nucleus	72.27	73.82
KRH37791	Soybean	nucleus	70.8	72.01
VIT_10s0003g04050.t01	Wine grape	nucleus	56.3	55.14
KRG89681	Soybean	extracellular, golgi	7.98	45.24
Bra010780.1-P	Field mustard	nucleus	37.4	42.58
CDX90242	Canola	nucleus	37.18	42.34
Bra014876.1-P	Field mustard	nucleus	37.82	41.47
CDX77599	Canola	nucleus	37.82	41.38
CDY70725	Canola	nucleus	37.18	41.16
CDY26275	Canola	cytosol	37.4	41.11
Bra032375.1-P	Field mustard	cytosol	37.4	41.11
CDX98192	Canola	nucleus	36.13	39.91
AT1G30280.1	Thale cress	cytosol	37.6	39.34
CDY21468	Canola	cytosol	27.31	38.01
CDY54130	Canola	cytosol	22.06	37.63
KRH53284	Soybean	nucleus	16.6	15.31
KRH64620	Soybean	nucleus	16.39	15.09
KRH61195	Soybean	nucleus	18.49	13.9
KRH51877	Soybean	nucleus	19.12	12.64
KRH53945	Soybean	nucleus, plastid	23.32	12.04
KRH40961	Soybean	endoplasmic reticulum	21.64	11.03
KRH63993	Soybean	nucleus, plastid	21.01	10.96
KRH59609	Soybean	nucleus	21.64	10.48
KRH75084	Soybean	nucleus	22.48	8.0
KRH69887	Soybean	nucleus	23.53	7.78
KRH70946	Soybean	nucleus	21.43	7.69
KRH76753	Soybean	nucleus	22.06	7.48
KRH28713	Soybean	nucleus	21.43	7.35
KRH08235	Soybean	nucleus	8.61	5.11

Protein Annotations

EMBL:ACUP02004817	EnsemblPlants:KRH42596	EnsemblPlantsGene:GLYMA_08G099600	EntrezGene:100804267	Gene3D:1.10.287.110	GO:GO:0005575
GO:GO:0006810	GO:GO:0006898	GO:GO:0008150	GO:GO:0031982	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR23172	PANTHER:PTHR23172:SF39	ProteinID:KRH42596	ProteinID:KRH42596.1
SEG:seg	SUPFAM:SSF46565	UniParc:UPI000296D9C6	UniProt:K7L5U2	MapMan:22.1.6.4	:

Description

hypothetical protein

Coordinates

chr8:-:7615734..7619312

Molecular Weight (calculated)

53741.0 Da

IEP (calculated)

4.794

GRAVY (calculated)

-0.719

Length

476 amino acids

Sequence
(BLAST)

001: MEESQRIGID LMRGFPRRRS VENRSSSRRR RSIFSGAGNS ESVDADDFAD VFGGPPRTLL AHKFSSSGSF YEEVFRPPEF TCPAPKDGRS LPVFRIPARN
101: EGFYSDIFGS DDDRRSRDRS RSLSKENSSS AMSSEELSPR RPAIADDVAL SGFASKLSNG ILSVPNDCYR PINIPWRWNP STVMPEAEEY PSKLGVPLFA
201: CKDQSFEIQH QDNEYKENFR SPHLGSSRRV SSPETISLES NSYQSTKVFT DDWELNSPFS VVSSLYQEPE AKFSVHDRVL SEQIIEGDDN DDDDDIMNSY
301: VIELNSNLRR EECGESAIDE AIAWAKEKFQ SQSSDEESSM RNDGKEQTVG IGSSDASEYH DNGIGIVQTQ EKRQTETEKL DSDIRLWSSG KETDIRLLLS
401: TLHHILRPES GWYAIPLKSL LESSQVKKAY QKARLCLHPD KLQQRGATLL QKYVAEKAFS ILQDAWAAFI SIDVSF

Best Arabidopsis Sequence Match ( AT1G30280.1 )
(BLAST)

001: MDESWRMKMG LSVDPFFSIA RKSMDARIDA EDFADVFGGP PRSVLTRKFS GDFSRSDCFY DEIFQPPGTF SSGGSLASSK SHGRNLPAFR IPSGGEGFYD
101: GVFGGRGGSA KEGSKKQSSM TKPRSNSSSM LSSEEASPHY PPPAAASGDD SGFSSFTSRL RPLNVPSRSH KRESKKQSFS AVPKAKDSFS GQNNTPEKAD
201: FYYKKTHFGG SRRASPETIS LDPNSFRRMD DYGPSSPASS PVSSFICEEE DDNTHAKQRT NRDCKVEEVV VEDEEDEEEE EMSSYVIEIN SDRFDRYREE
301: GGGGGGNSDS NDMDEAIAWA KERSQRPEAK QTEEDVIDSR RSEEEPKSEE EMEMEMKDEE IRIWLTGKET NIRLLLSTLH HVLWSNSNWD SIPLANLRDG
401: SQVKKAYQRA RLCLHPDKLQ QRGGTSPIQK SVASRVFAIL QEAWAVYVTN EGLSS

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C752]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.