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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra032375.1-P Field mustard cytosol 99.54 99.54
CDY21468 Canola cytosol 75.06 95.03
CDY54130 Canola cytosol 55.89 86.74
CDX77599 Canola nucleus 81.29 80.92
CDX90242 Canola nucleus 78.06 80.86
CDY70725 Canola nucleus 79.91 80.47
CDX98192 Canola nucleus 79.91 80.28
AT1G30280.1 Thale cress cytosol 82.68 78.68
KRH37791 Soybean nucleus 43.42 40.17
KRH12827 Soybean nucleus 42.49 39.48
VIT_10s0003g04050.t01 Wine grape nucleus 44.11 39.3
KRH58698 Soybean nucleus 41.34 38.49
KRH44795 Soybean nucleus 39.72 37.97
KRH42596 Soybean nucleus 41.11 37.4
CDX88363 Canola cytosol 12.93 23.43
CDX87523 Canola cytosol 12.7 17.97
CDY04660 Canola cytosol 15.7 14.2
CDY08188 Canola nucleus 14.78 13.14
CDY00396 Canola nucleus 15.47 12.79
CDX73142 Canola nucleus 16.86 12.33
CDY45410 Canola nucleus 16.86 12.29
CDY01318 Canola cytosol 14.55 12.26
CDY31429 Canola plastid 20.79 11.03
CDX76445 Canola nucleus 21.02 10.91
CDX69230 Canola nucleus 22.4 7.96
CDX75581 Canola nucleus 21.94 7.91
CDY59467 Canola mitochondrion 17.78 7.79
CDX73162 Canola nucleus 21.02 6.57
CDY45424 Canola nucleus 20.79 6.27
Protein Annotations
EnsemblPlants:CDY26275EnsemblPlantsGene:GSBRNA2T00034951001Gene3D:1.10.287.110InterPro:DnaJ_domainInterPro:IPR001623InterPro:IPR036869
InterPro:J_dom_sfncoils:CoilPANTHER:PTHR23172PANTHER:PTHR23172:SF39ProteinID:CDY26275ProteinID:CDY26275.1
SEG:segSUPFAM:SSF46565UniParc:UPI0004EEFAC7UniProt:A0A078GIH6MapMan:22.1.6.4:
Description
BnaA09g26260DBnaA09g26260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GIH6]
Coordinates
chrLK032187:+:76429..78090
Molecular Weight (calculated)
48747.3 Da
IEP (calculated)
5.198
GRAVY (calculated)
-0.905
Length
433 amino acids
Sequence
(BLAST)
001: MDESWRMKLG LNVDPFFSIA RRSMDVRIDA QDFSDVFGGP PRSVLTRKFS GDFSRSDCFY DEIFRPRGMF SCGALPSSKS HGRNLPAFRI PSGGDGFYDG
101: VFGGRSGTEK EGTKKQSPIT KSRSNSSPPP AGTSDDDAGI SSFTSTLRPL NVPSRSHKRE SKKQSFPVFP TSLSGQDLTP GKFDFCYRKP HFGSSRRSSP
201: ETMTLDPQSF RRMDDFGPSS PASSPVSSFI REDEYETEAK QRTTQDCKVE QEDDEDEMSS YVIEINSDRF DRYRDGGSGG GNSDSNDMDE AIAWARERSQ
301: RPETKQAQED LIDSRRSEEE EEEAKSEEEM EMEMKDEEIR IWLTGKETNI RLLLSTLHHV LWSNSNWQAI PLANLRDGSQ VKKAYQKARL CLHPDKLQQR
401: GGTSPLQKSV ASRVFSILQE AWGVYLTNEG LSS
Best Arabidopsis Sequence Match ( AT1G30280.1 )
(BLAST)
001: MDESWRMKMG LSVDPFFSIA RKSMDARIDA EDFADVFGGP PRSVLTRKFS GDFSRSDCFY DEIFQPPGTF SSGGSLASSK SHGRNLPAFR IPSGGEGFYD
101: GVFGGRGGSA KEGSKKQSSM TKPRSNSSSM LSSEEASPHY PPPAAASGDD SGFSSFTSRL RPLNVPSRSH KRESKKQSFS AVPKAKDSFS GQNNTPEKAD
201: FYYKKTHFGG SRRASPETIS LDPNSFRRMD DYGPSSPASS PVSSFICEEE DDNTHAKQRT NRDCKVEEVV VEDEEDEEEE EMSSYVIEIN SDRFDRYREE
301: GGGGGGNSDS NDMDEAIAWA KERSQRPEAK QTEEDVIDSR RSEEEPKSEE EMEMEMKDEE IRIWLTGKET NIRLLLSTLH HVLWSNSNWD SIPLANLRDG
401: SQVKKAYQRA RLCLHPDKLQ QRGGTSPIQK SVASRVFAIL QEAWAVYVTN EGLSS
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C752]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.