CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014876.1-P	Field mustard	nucleus	99.77	100.0
CDX98192	Canola	nucleus	93.79	94.66
CDX90242	Canola	nucleus	82.07	85.41
CDY70725	Canola	nucleus	82.53	83.49
AT1G30280.1	Thale cress	cytosol	85.75	81.98
CDY26275	Canola	cytosol	80.92	81.29
CDY54130	Canola	cytosol	50.57	78.85
CDY21468	Canola	cytosol	58.85	74.85
VIT_10s0003g04050.t01	Wine grape	nucleus	46.21	41.36
KRH37791	Soybean	nucleus	44.14	41.03
KRH12827	Soybean	nucleus	43.45	40.56
KRH58698	Soybean	nucleus	42.3	39.57
KRH44795	Soybean	nucleus	40.23	38.63
KRH42596	Soybean	nucleus	41.38	37.82
CDX88363	Canola	cytosol	13.1	23.85
CDX87523	Canola	cytosol	13.1	18.63
CDY04660	Canola	cytosol	15.63	14.2
CDY08188	Canola	nucleus	14.71	13.14
CDY45410	Canola	nucleus	17.93	13.13
CDY00396	Canola	nucleus	15.63	12.98
CDX73142	Canola	nucleus	17.47	12.84
CDY01318	Canola	cytosol	14.94	12.65
CDX76445	Canola	nucleus	20.92	10.91
CDY31429	Canola	plastid	20.46	10.91
CDY59467	Canola	mitochondrion	18.39	8.09
CDX69230	Canola	nucleus	22.07	7.88
CDX75581	Canola	nucleus	21.38	7.74
CDX73162	Canola	nucleus	20.23	6.35
CDY45424	Canola	nucleus	20.23	6.13

Protein Annotations

EnsemblPlants:CDX77599	EnsemblPlantsGene:GSBRNA2T00128521001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	ncoils:Coil	PANTHER:PTHR23172	PANTHER:PTHR23172:SF39	ProteinID:CDX77599	ProteinID:CDX77599.1
SEG:seg	SUPFAM:SSF46565	UniParc:UPI0004EE4DA3	MapMan:22.1.6.4	:	:

Description

BnaA07g07370D

Coordinates

chrLK031811:+:2202299..2204011

Molecular Weight (calculated)

48361.8 Da

IEP (calculated)

5.431

GRAVY (calculated)

-0.849

Length

435 amino acids

Sequence
(BLAST)

001: MDESWRKKMG LNLDPFFSIA RKSMDARIDA EDFSDVFGGP PRSVLTRKFS GDFSRSDCFY DEIFLPPGIR SGGTLPSSKS HGRNLPAFRI PSGGEGFYDG
101: VFGGEGSQKQ SAVAKSKSRS KSSSVLTSEE VSPRYQPAAA GPGDEAGFSS FTSRLRPLNV PSRSHKRESK KQSFQAFPTS DDSFSGHANT PEKSDFYYKK
201: PHFGGSRRSS PETMSLDPFS FRRMDDFGPS SPASSPVSSF ICESEGKQRM TEEEEEEEEE EMSSYVIEIN SNRFDRGSGG GGGGGNSDSN DMDEAIAWAK
301: ERSQRPEAKP TEQDLIDSRR SEEEEAKSEE EMEMEIKDEE IRIWLTGKET NIRLLLSTLH HVLWSNSNWH AIPLANLRDG SQVKKAYQKA RLCLHPDKLQ
401: QRGGTSPLQK SVASRVFSIL QEAWAVYVTN EGLSS

Best Arabidopsis Sequence Match ( AT1G30280.1 )
(BLAST)

001: MDESWRMKMG LSVDPFFSIA RKSMDARIDA EDFADVFGGP PRSVLTRKFS GDFSRSDCFY DEIFQPPGTF SSGGSLASSK SHGRNLPAFR IPSGGEGFYD
101: GVFGGRGGSA KEGSKKQSSM TKPRSNSSSM LSSEEASPHY PPPAAASGDD SGFSSFTSRL RPLNVPSRSH KRESKKQSFS AVPKAKDSFS GQNNTPEKAD
201: FYYKKTHFGG SRRASPETIS LDPNSFRRMD DYGPSSPASS PVSSFICEEE DDNTHAKQRT NRDCKVEEVV VEDEEDEEEE EMSSYVIEIN SDRFDRYREE
301: GGGGGGNSDS NDMDEAIAWA KERSQRPEAK QTEEDVIDSR RSEEEPKSEE EMEMEMKDEE IRIWLTGKET NIRLLLSTLH HVLWSNSNWD SIPLANLRDG
401: SQVKKAYQRA RLCLHPDKLQ QRGGTSPIQK SVASRVFAIL QEAWAVYVTN EGLSS

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C752]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.