CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44795	Soybean	nucleus	91.61	94.04
KRH42596	Soybean	nucleus	94.62	92.44
KRH12827	Soybean	nucleus	75.7	75.54
KRH37791	Soybean	nucleus	74.41	73.93
VIT_10s0003g04050.t01	Wine grape	nucleus	58.92	56.38
KRG89681	Soybean	extracellular, golgi	8.17	45.24
Bra010780.1-P	Field mustard	nucleus	39.35	43.78
CDX90242	Canola	nucleus	39.14	43.54
Bra014876.1-P	Field mustard	nucleus	39.57	42.4
CDX77599	Canola	nucleus	39.57	42.3
CDY70725	Canola	nucleus	38.49	41.63
CDY26275	Canola	cytosol	38.49	41.34
Bra032375.1-P	Field mustard	cytosol	38.49	41.34
CDX98192	Canola	nucleus	37.85	40.84
AT1G30280.1	Thale cress	cytosol	39.35	40.22
CDY54130	Canola	cytosol	23.44	39.07
CDY21468	Canola	cytosol	28.17	38.3
KRH53284	Soybean	nucleus	16.99	15.31
KRH64620	Soybean	nucleus	16.77	15.09
KRH61195	Soybean	nucleus	18.28	13.43
KRH51877	Soybean	nucleus	18.92	12.22
KRH53945	Soybean	nucleus, plastid	23.87	12.04
KRH40961	Soybean	endoplasmic reticulum	22.37	11.13
KRH63993	Soybean	nucleus, plastid	21.51	10.96
KRH59609	Soybean	nucleus	22.37	10.58
KRH75084	Soybean	nucleus	22.8	7.92
KRH69887	Soybean	nucleus	23.66	7.64
KRH70946	Soybean	nucleus	21.72	7.62
KRH76753	Soybean	nucleus	22.15	7.34
KRH28713	Soybean	nucleus	21.51	7.2
KRH08235	Soybean	nucleus	8.39	4.86

Protein Annotations

EMBL:ACUP02003282	EnsemblPlants:KRH58698	EnsemblPlantsGene:GLYMA_05G143200	EntrezGene:100820544	Gene3D:1.10.287.110	GO:GO:0005575
GO:GO:0006810	GO:GO:0006898	GO:GO:0008150	GO:GO:0031982	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR23172	PANTHER:PTHR23172:SF39	ProteinID:KRH58698	ProteinID:KRH58698.1
SEG:seg	SUPFAM:SSF46565	UniParc:UPI0002339C7F	UniProt:I1K3H3	MapMan:22.1.6.4	:

Description

hypothetical protein

Coordinates

chr5:-:33673677..33676229

Molecular Weight (calculated)

52598.8 Da

IEP (calculated)

4.850

GRAVY (calculated)

-0.715

Length

465 amino acids

Sequence
(BLAST)

001: MDESQRIGIG LMRSFPRRRS VEDRSSSRRR RSIFSGAGIS ESVDADDFAD VFGGPPRTLL AHKFSSSGSF YEEVFRPPEF TCPAPKGGRS LPVFRIPARN
101: EGFYSDIFGS DDERRSRERS RSLSKENSSS AMSSEELSPR RPAIGDDVAL SGFASKLRPI NIPWRWNSST VMPEAEEYPS KLGVPLFACK DQSFEIQHQD
201: NEYKENFRSP HLGSSRRVSS PETISLESNS YQSIKVFTDD WELNSPFSDV SSLYQEPGAK FSVHDRVLSE QIIEGDDDDD DDDEIMSSYV IELNSNLRRE
301: ECGESAIDEA IAWAKEKFQS RSSDEESSVR NYGKEKTVGI GSSDASEYHD DGIEIVQTQE KQQTETEKLD RDIRLWSSGK ETDIRLLLST LHHILRPESG
401: WYAIPLKSLL ESSQVKKAYQ KARLCLHPDK LQQRGATLLQ KYVAEKAFSI LQDAWAAFIS IDVSF

Best Arabidopsis Sequence Match ( AT1G30280.1 )
(BLAST)

001: MDESWRMKMG LSVDPFFSIA RKSMDARIDA EDFADVFGGP PRSVLTRKFS GDFSRSDCFY DEIFQPPGTF SSGGSLASSK SHGRNLPAFR IPSGGEGFYD
101: GVFGGRGGSA KEGSKKQSSM TKPRSNSSSM LSSEEASPHY PPPAAASGDD SGFSSFTSRL RPLNVPSRSH KRESKKQSFS AVPKAKDSFS GQNNTPEKAD
201: FYYKKTHFGG SRRASPETIS LDPNSFRRMD DYGPSSPASS PVSSFICEEE DDNTHAKQRT NRDCKVEEVV VEDEEDEEEE EMSSYVIEIN SDRFDRYREE
301: GGGGGGNSDS NDMDEAIAWA KERSQRPEAK QTEEDVIDSR RSEEEPKSEE EMEMEMKDEE IRIWLTGKET NIRLLLSTLH HVLWSNSNWD SIPLANLRDG
401: SQVKKAYQRA RLCLHPDKLQ QRGGTSPIQK SVASRVFAIL QEAWAVYVTN EGLSS

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C752]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.