Factsheet for Bra010780.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90242	Canola	nucleus	99.52	99.52
Bra014876.1-P	Field mustard	nucleus	85.41	82.26
Bra032375.1-P	Field mustard	cytosol	80.38	77.6
AT1G30280.1	Thale cress	cytosol	84.45	77.58
KRH37791	Soybean	nucleus	45.45	40.6
KRH12827	Soybean	nucleus	44.26	39.7
KRH58698	Soybean	nucleus	43.78	39.35
VIT_10s0003g04050.t01	Wine grape	nucleus	45.69	39.3
KRH44795	Soybean	nucleus	41.87	38.63
KRH42596	Soybean	nucleus	42.58	37.4
Bra015674.1-P	Field mustard	cytosol	14.11	19.41
Bra017937.1-P	Field mustard	nucleus	15.79	13.55
Bra012290.1-P	Field mustard	cytosol	15.31	12.43
Bra015866.1-P	Field mustard	nucleus	18.66	12.23
Bra020913.1-P	Field mustard	nucleus	20.57	10.29
Bra011688.1-P	Field mustard	nucleus	20.81	6.95
Bra015852.1-P	Field mustard	nucleus	20.81	5.86

Protein Annotations

EnsemblPlants:Bra010780.1	EnsemblPlants:Bra010780.1-P	EnsemblPlantsGene:Bra010780	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR23172	PANTHER:PTHR23172:SF39	SEG:seg	SUPFAM:SSF46565
UniParc:UPI0002546F14	UniProt:M4D2S7	MapMan:22.1.6.4	:	:	:

Description

AT1G30280 (E=2e-150) | heat shock protein binding

Coordinates

chrA08:+:16413472..16415080

Molecular Weight (calculated)

46791.7 Da

IEP (calculated)

5.015

GRAVY (calculated)

-0.826

Length

418 amino acids

Sequence
(BLAST)

001: MDESWRKKMG LNVDPFFSVA RRSMDARIDA EDFADVFGGP PRSFLARKFS GDFSRSDCFY DEVFLPPGIS SGGTLPSSKS HGRNLTAFRI PSGADGFYDG
101: VFGGRGGAAK KQSPTAKSNS SSVLTSEEVS PHYPPPAATS GDDAGFSSFT SRLRPLNVPS RKRESKKQSF PAFPTSGDSF SGHERSDFYY RKPHFSGSRR
201: SSPETMSFDP SSFRRIDDFG PSSPASSPVS SFVYEEENTE RKGDCNVDEV EEEEMSSYVI EINSDRFDRG NSDSNDMDEA IAWAKERSQR PEAKQTQEED
301: LMDSRSEEAK SEEEMEMEMK DEEIRIWLTG KETNIRLLLS TLHHVLWSDS NWHEIPLENL RDGSQVKKAY QKARLCLHPD KLQQRGGTSP VQKSVASRVF
401: SILQEAWAVY VTNEGLSS

Best Arabidopsis Sequence Match ( AT1G30280.1 )
(BLAST)

001: MDESWRMKMG LSVDPFFSIA RKSMDARIDA EDFADVFGGP PRSVLTRKFS GDFSRSDCFY DEIFQPPGTF SSGGSLASSK SHGRNLPAFR IPSGGEGFYD
101: GVFGGRGGSA KEGSKKQSSM TKPRSNSSSM LSSEEASPHY PPPAAASGDD SGFSSFTSRL RPLNVPSRSH KRESKKQSFS AVPKAKDSFS GQNNTPEKAD
201: FYYKKTHFGG SRRASPETIS LDPNSFRRMD DYGPSSPASS PVSSFICEEE DDNTHAKQRT NRDCKVEEVV VEDEEDEEEE EMSSYVIEIN SDRFDRYREE
301: GGGGGGNSDS NDMDEAIAWA KERSQRPEAK QTEEDVIDSR RSEEEPKSEE EMEMEMKDEE IRIWLTGKET NIRLLLSTLH HVLWSNSNWD SIPLANLRDG
401: SQVKKAYQRA RLCLHPDKLQ QRGGTSPIQK SVASRVFAIL QEAWAVYVTN EGLSS

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C752]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.