Factsheet for Bra012290.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01318	Canola	cytosol	97.28	97.47
KRG89681	Soybean	extracellular, golgi	12.43	76.19
Bra017937.1-P	Field mustard	nucleus	71.46	75.56
AT1G21660.1	Thale cress	nucleus	75.15	74.0
Bra015674.1-P	Field mustard	cytosol	34.17	57.89
PGSC0003DMT400030755	Potato	nucleus	21.16	56.19
KRH64620	Soybean	nucleus	42.14	41.97
KRH53284	Soybean	nucleus	41.75	41.67
VIT_18s0001g01980.t01	Wine grape	cytosol	38.45	38.37
Solyc06g060090.2.1	Tomato	nucleus	34.95	36.96
Bra020913.1-P	Field mustard	nucleus	39.22	24.16
Os01t0355500-02	Rice	nucleus	39.22	21.31
OQU86832	Sorghum	nucleus	37.86	20.33
Zm00001d040795_P002	Maize	cytosol	28.74	16.1
Bra010780.1-P	Field mustard	nucleus	12.43	15.31
Bra014876.1-P	Field mustard	nucleus	12.62	14.98
Bra032375.1-P	Field mustard	cytosol	12.23	14.55
Bra015866.1-P	Field mustard	nucleus	14.95	12.07
Bra011688.1-P	Field mustard	nucleus	25.05	10.3
Bra015852.1-P	Field mustard	nucleus	23.11	8.01

Protein Annotations

EnsemblPlants:Bra012290.1	EnsemblPlants:Bra012290.1-P	EnsemblPlantsGene:Bra012290	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR23172	PANTHER:PTHR23172:SF51	PFscan:PS50076	SEG:seg
SUPFAM:SSF46565	UniParc:UPI000254150E	UniProt:M4D730	MapMan:22.1.6.4	:	:

Description

AT1G21660 (E=5e-165) | heat shock protein binding

Coordinates

chrA07:-:8783914..8786472

Molecular Weight (calculated)

55483.1 Da

IEP (calculated)

6.226

GRAVY (calculated)

-0.656

Length

515 amino acids

Sequence
(BLAST)

001: MDEFGVLTER YGIKPQGKSA PMAASKRPPT TTPQSLNNLG VANPKSTSYS SNKVSVNDDF DVFGGGLNKP TNTKSSSLND DGLMFSTNFG MKTSSSSSSA
101: RGFDDVDLFG AVPVSVGVGN DDIFGAFSSS TKQDAAGVDD LLGDMGGFGL ESRTWNQSSS GKNGFDELIP GFGGSSQTTS SKTSASSIFA DADPFVVLES
201: TTSAAHSSSG LFVDPLDEFA ASVSSQGKKP SNTKLKPPPK PTQKVDRVKS SGLSSIDELE DFAMGSSTMR RSASASDTAS KFREAEDAGT KKQQFGADDL
301: DSVFSSGHRS SSVPKSRTTT EATRKQAVNE PKKTPNGVSS AKKPPPPANL VDDFSALFGG DPIFREFEEI PGESDERRKA RWDREQRTKS RVAQAVADMN
401: NRDHQSRIEQ EQRTRISEGV DAEIRRWATG KEGNMRALLS SLQIVLWPGC GWEAVSLTDL ITSSAVKKVY RKATLYVHPD KVQQNGATLE QKYIAEKVFD
501: ILKEAWNKFN KEELS

Best Arabidopsis Sequence Match ( AT1G21660.1 )
(BLAST)

001: MDEFGVLTER YGIKPQGKSA PMAASKRNPN NNGQSWNFGT GSSGLNAKST SFSSNSSWNK DSTNGSLFDG DDIFFPANST NRKVSNDFDV FAGLNKSSSS
101: GDNSKSSLND DLFFSNFGNP GKTTPSSADD LFGGVIPGSK SSDSVKNDDL FGSFSSSEKQ YAAAVDDLLG LGKNEAGYDG LIPGFGGSTQ TTSSKTTPSN
201: FDATDPFVVL ESTTSTGLFV DPLEEFAATV SSQGIKPSNT SHTSTKLKPP PKPTQKVNRG KSVGMSSIDE LEDFAMGTMR RSASASDTAS KYREAEDAAT
301: KNKQFGVDDL DSFFSARSSS VPKSRTTTET TRKQASNAPK KTPNGVSNAK KPPAPANLVD DFSALFGEDP IFRQFEEIPG ESEERRKARW DREQRTKSRV
401: AQAVADMNNR DHQSRIEQEQ RTRISETVDT EIRRWATGKE GNMRALLSSL HIVLWPGCGW EAVSITDLIT SSAVKKVYRK ATLYVHPDKV QQKGATLEQK
501: YIAEKVFDIL KEAWNKFNKE ELS

Arabidopsis Description

At1g21660 [Source:UniProtKB/TrEMBL;Acc:Q9XI12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.