Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87523 | Canola | cytosol | 94.41 | 93.79 |
| KRG89681 | Soybean | extracellular, golgi | 17.76 | 64.29 |
| PGSC0003DMT400030755 | Potato | nucleus | 31.58 | 49.48 |
| Bra012290.1-P | Field mustard | cytosol | 57.89 | 34.17 |
| Bra017937.1-P | Field mustard | nucleus | 53.95 | 33.68 |
| VIT_18s0001g01980.t01 | Wine grape | cytosol | 46.71 | 27.52 |
| Solyc06g060090.2.1 | Tomato | nucleus | 42.11 | 26.28 |
| KRH53284 | Soybean | nucleus | 44.41 | 26.16 |
| KRH64620 | Soybean | nucleus | 44.41 | 26.11 |
| Bra020913.1-P | Field mustard | nucleus | 46.05 | 16.75 |
| Bra010780.1-P | Field mustard | nucleus | 19.41 | 14.11 |
| Bra014876.1-P | Field mustard | nucleus | 19.74 | 13.82 |
| Os01t0355500-02 | Rice | nucleus | 42.43 | 13.61 |
| Bra032375.1-P | Field mustard | cytosol | 19.08 | 13.39 |
| OQU86832 | Sorghum | nucleus | 40.79 | 12.93 |
| Bra015866.1-P | Field mustard | nucleus | 21.38 | 10.19 |
| Zm00001d040795_P002 | Maize | cytosol | 28.62 | 9.47 |
| Bra011688.1-P | Field mustard | nucleus | 34.21 | 8.31 |
| Bra015852.1-P | Field mustard | nucleus | 29.28 | 5.99 |
Protein Annotations
Description
AT1G21660 (E=2e-062) | heat shock protein binding
Coordinates
chrA07:+:21424862..21426569
Molecular Weight (calculated)
33826.6 Da
IEP (calculated)
4.560
GRAVY (calculated)
-0.553
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEFVALTAV YGLKPRGKSA PMAALKRSAF DRNSVKTSPF DSGDDDANAE LTLKDSKFDS LNPGGFDDFS VFDELIKLSS TNDSGDNDLM GGLTGLSPNE
101: DGFDELIPGF GGSGQPSNNE FQETEAVQVN KQQFGLDDDL EALFISPVAS AQFLDDLSPL FGGKSDKRRL ARWEREQIIK DRMEKAIADM NNRDHQIQIE
201: QEERSRISET LDAEIKLWAT GKEGNLRALI SSLHLVLWPG CGWEAVSLTD LITSAAVKKV YKKANLYVHP DKVHQKGTQQ KYIAEKVFNI LQEAWNKFNK
301: EELS
101: DGFDELIPGF GGSGQPSNNE FQETEAVQVN KQQFGLDDDL EALFISPVAS AQFLDDLSPL FGGKSDKRRL ARWEREQIIK DRMEKAIADM NNRDHQIQIE
201: QEERSRISET LDAEIKLWAT GKEGNLRALI SSLHLVLWPG CGWEAVSLTD LITSAAVKKV YKKANLYVHP DKVHQKGTQQ KYIAEKVFNI LQEAWNKFNK
301: EELS
001: MDEFGVLTER YGIKPQGKSA PMAASKRNPN NNGQSWNFGT GSSGLNAKST SFSSNSSWNK DSTNGSLFDG DDIFFPANST NRKVSNDFDV FAGLNKSSSS
101: GDNSKSSLND DLFFSNFGNP GKTTPSSADD LFGGVIPGSK SSDSVKNDDL FGSFSSSEKQ YAAAVDDLLG LGKNEAGYDG LIPGFGGSTQ TTSSKTTPSN
201: FDATDPFVVL ESTTSTGLFV DPLEEFAATV SSQGIKPSNT SHTSTKLKPP PKPTQKVNRG KSVGMSSIDE LEDFAMGTMR RSASASDTAS KYREAEDAAT
301: KNKQFGVDDL DSFFSARSSS VPKSRTTTET TRKQASNAPK KTPNGVSNAK KPPAPANLVD DFSALFGEDP IFRQFEEIPG ESEERRKARW DREQRTKSRV
401: AQAVADMNNR DHQSRIEQEQ RTRISETVDT EIRRWATGKE GNMRALLSSL HIVLWPGCGW EAVSITDLIT SSAVKKVYRK ATLYVHPDKV QQKGATLEQK
501: YIAEKVFDIL KEAWNKFNKE ELS
101: GDNSKSSLND DLFFSNFGNP GKTTPSSADD LFGGVIPGSK SSDSVKNDDL FGSFSSSEKQ YAAAVDDLLG LGKNEAGYDG LIPGFGGSTQ TTSSKTTPSN
201: FDATDPFVVL ESTTSTGLFV DPLEEFAATV SSQGIKPSNT SHTSTKLKPP PKPTQKVNRG KSVGMSSIDE LEDFAMGTMR RSASASDTAS KYREAEDAAT
301: KNKQFGVDDL DSFFSARSSS VPKSRTTTET TRKQASNAPK KTPNGVSNAK KPPAPANLVD DFSALFGEDP IFRQFEEIPG ESEERRKARW DREQRTKSRV
401: AQAVADMNNR DHQSRIEQEQ RTRISETVDT EIRRWATGKE GNMRALLSSL HIVLWPGCGW EAVSITDLIT SSAVKKVYRK ATLYVHPDKV QQKGATLEQK
501: YIAEKVFDIL KEAWNKFNKE ELS
Arabidopsis Description
At1g21660 [Source:UniProtKB/TrEMBL;Acc:Q9XI12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.