Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400052312 | Potato | cytosol | 42.78 | 79.81 |
| KRG89681 | Soybean | extracellular, golgi | 29.38 | 67.86 |
| Solyc06g060090.2.1 | Tomato | nucleus | 96.39 | 38.4 |
| CDX88363 | Canola | cytosol | 46.39 | 37.66 |
| Bra015674.1-P | Field mustard | cytosol | 49.48 | 31.58 |
| CDX87523 | Canola | cytosol | 48.97 | 31.05 |
| VIT_18s0001g01980.t01 | Wine grape | cytosol | 63.4 | 23.84 |
| CDY04660 | Canola | cytosol | 57.73 | 23.38 |
| KRH64620 | Soybean | nucleus | 59.28 | 22.24 |
| KRH53284 | Soybean | nucleus | 58.76 | 22.09 |
| CDY01318 | Canola | cytosol | 56.7 | 21.4 |
| Bra012290.1-P | Field mustard | cytosol | 56.19 | 21.16 |
| CDY08188 | Canola | nucleus | 53.09 | 21.15 |
| Bra017937.1-P | Field mustard | nucleus | 53.09 | 21.15 |
| AT1G21660.1 | Thale cress | nucleus | 56.19 | 20.84 |
| CDY00396 | Canola | nucleus | 56.19 | 20.8 |
| Os01t0355500-02 | Rice | nucleus | 65.46 | 13.4 |
| PGSC0003DMT400071173 | Potato | nucleus | 64.43 | 13.1 |
| OQU86832 | Sorghum | nucleus | 63.92 | 12.93 |
| PGSC0003DMT400071608 | Potato | nucleus | 32.99 | 9.17 |
| Zm00001d040795_P002 | Maize | cytosol | 37.63 | 7.94 |
| PGSC0003DMT400009048 | Potato | nucleus | 50.0 | 6.72 |
| PGSC0003DMT400009477 | Potato | nucleus | 49.48 | 6.04 |
| PGSC0003DMT400052311 | Potato | nucleus | 23.71 | 5.45 |
| PGSC0003DMT400071606 | Potato | nucleus | 7.73 | 2.66 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400030755 | EnsemblPlantsGene:PGSC0003DMG400011780 | Gene3D:1.10.287.110 | InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil |
| PANTHER:PTHR23172 | PANTHER:PTHR23172:SF54 | PGSC:PGSC0003DMG400011780 | SUPFAM:SSF46565 | UniParc:UPI000295A289 | UniProt:M1AUQ7 |
| MapMan:22.1.6.4 | : | : | : | : | : |
Description
Auxilin [Source:PGSC_GENE;Acc:PGSC0003DMG400011780]
Coordinates
chr6:+:42751074..42757926
Molecular Weight (calculated)
22363.6 Da
IEP (calculated)
9.629
GRAVY (calculated)
-0.839
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAGFIKKGR PEEKKSSLSK KNVSPVKNLV DDLMFFGDSA PSSEAFQEVE DESEERRNAR LKHHLKTQER MAKALAEKTQ RDLQSQNEQE EKHRLADTLN
101: YDIKRWATGK EGNLRALLSS LQHVLWPECG WQPVSLTDLI TSISVKKIYH KATLCVHPDK VQQKGATVRQ KYIAEKVFDL LKEAWNKFNS EELR
101: YDIKRWATGK EGNLRALLSS LQHVLWPECG WQPVSLTDLI TSISVKKIYH KATLCVHPDK VQQKGATVRQ KYIAEKVFDL LKEAWNKFNS EELR
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFATAAGKK SDSLPVFDDP GRDGDDLLFK DVFSGPPPPK YGSSSGDSRS PSAPAFDYDA
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KPGPDMNSKG KSHLRPPGNI SGSQSPPVES PGSYHSKKVS
301: FEDFLEPHNM STPPPTNSNG SFESSDDVWL TVSEIPLFTQ PTSAPPPTRP PPPRPTRPIK KKVNEPSIPT SAYHSHVPSS GRASVNSPTA SQMDELDDFS
401: IGRNQTAANG YPDPSSGEDS DVFSTAAASA AAMKDAMDKA EAKFRHAKER REKENLKASR SREGDHTENY DSRERELREK QVRLDRERAE REAEMEKAQE
501: REKEEREREQ KRIERERERL VARQAVERAT REARERAATE AHAKVQRAAV GKATDARERA ERAAVQRAHA EARERAAAGA RDKAAKAAAE AREKAEKAAA
601: EAKERANAEA REKETRVRAE RAAVERAAAE ARGRAAAQAK AKQQQENTND LDSFFSSISR PNSAPRQRTN PLDPFQDSWN KGGSFESSRE SLRVPPGQPE
701: NLRKTSSVTN IVDDLSSIFG ASASQSGGFQ DVDGETEERR RARLERHQRT QERAAKALAE KNERDLQVQR EQVEKDRIGV TLDVEIKRWG AGKEGNLRAL
801: LSTLQYVLWP ECGWQPVSLT DLITAASVKK VYRKATLCIH PDKVQQKGAN LQQKYIAEKV FDMLKEAWNK FNSEELF
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KPGPDMNSKG KSHLRPPGNI SGSQSPPVES PGSYHSKKVS
301: FEDFLEPHNM STPPPTNSNG SFESSDDVWL TVSEIPLFTQ PTSAPPPTRP PPPRPTRPIK KKVNEPSIPT SAYHSHVPSS GRASVNSPTA SQMDELDDFS
401: IGRNQTAANG YPDPSSGEDS DVFSTAAASA AAMKDAMDKA EAKFRHAKER REKENLKASR SREGDHTENY DSRERELREK QVRLDRERAE REAEMEKAQE
501: REKEEREREQ KRIERERERL VARQAVERAT REARERAATE AHAKVQRAAV GKATDARERA ERAAVQRAHA EARERAAAGA RDKAAKAAAE AREKAEKAAA
601: EAKERANAEA REKETRVRAE RAAVERAAAE ARGRAAAQAK AKQQQENTND LDSFFSSISR PNSAPRQRTN PLDPFQDSWN KGGSFESSRE SLRVPPGQPE
701: NLRKTSSVTN IVDDLSSIFG ASASQSGGFQ DVDGETEERR RARLERHQRT QERAAKALAE KNERDLQVQR EQVEKDRIGV TLDVEIKRWG AGKEGNLRAL
801: LSTLQYVLWP ECGWQPVSLT DLITAASVKK VYRKATLCIH PDKVQQKGAN LQQKYIAEKV FDMLKEAWNK FNSEELF
Arabidopsis Description
AUXI1Auxilin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.