Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g082840.2.1 | Tomato | nucleus | 95.6 | 94.7 |
| PGSC0003DMT400052312 | Potato | cytosol | 10.17 | 93.27 |
| PGSC0003DMT400052311 | Potato | nucleus | 62.26 | 70.38 |
| PGSC0003DMT400030755 | Potato | nucleus | 13.1 | 64.43 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 10.8 | 63.58 |
| GSMUA_Achr2P02260_001 | Banana | nucleus | 17.09 | 58.84 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 56.29 | 56.05 |
| KRH40961 | Soybean | endoplasmic reticulum | 54.3 | 55.46 |
| KRH53945 | Soybean | nucleus, plastid | 52.94 | 54.77 |
| CDY31429 | Canola | plastid | 46.54 | 54.41 |
| KRH63993 | Soybean | nucleus, plastid | 51.68 | 54.06 |
| AT4G12770.1 | Thale cress | nucleus | 50.1 | 53.65 |
| CDX76445 | Canola | nucleus | 46.65 | 53.36 |
| Bra020913.1-P | Field mustard | nucleus | 46.54 | 53.11 |
| KRH59609 | Soybean | nucleus | 53.88 | 52.29 |
| AT4G12780.1 | Thale cress | nucleus | 49.37 | 52.1 |
| HORVU5Hr1G024350.1 | Barley | plasma membrane | 39.52 | 51.08 |
| GSMUA_Achr11P... | Banana | nucleus | 49.48 | 50.86 |
| TraesCS5A01G092500.2 | Wheat | nucleus | 46.02 | 49.22 |
| TraesCS5D01G104700.2 | Wheat | nucleus | 45.81 | 49.16 |
| EES17168 | Sorghum | mitochondrion, nucleus | 46.12 | 49.05 |
| GSMUA_Achr3P24020_001 | Banana | nucleus | 40.99 | 49.0 |
| Os12t0548200-02 | Rice | plasma membrane | 47.38 | 48.86 |
| Zm00001d041647_P004 | Maize | nucleus | 44.86 | 48.42 |
| TraesCS5B01G098600.2 | Wheat | nucleus | 45.07 | 48.21 |
| GSMUA_Achr1P26650_001 | Banana | nucleus | 43.4 | 47.15 |
| Zm00001d023838_P014 | Maize | mitochondrion, nucleus | 44.03 | 46.51 |
| Os11t0661200-01 | Rice | nucleus | 41.93 | 45.05 |
| EES08933 | Sorghum | nucleus, plastid | 41.51 | 43.56 |
| Zm00001d007692_P003 | Maize | plasma membrane | 40.25 | 43.29 |
| TraesCS4D01G145200.4 | Wheat | nucleus | 39.1 | 42.34 |
| HORVU4Hr1G033280.4 | Barley | nucleus | 39.2 | 40.17 |
| TraesCS4A01G169200.1 | Wheat | nucleus | 38.78 | 39.19 |
| TraesCS4B01G126200.1 | Wheat | nucleus | 38.16 | 38.97 |
| PGSC0003DMT400009048 | Potato | nucleus | 26.1 | 17.26 |
| PGSC0003DMT400071608 | Potato | nucleus | 12.47 | 17.05 |
| PGSC0003DMT400009477 | Potato | nucleus | 25.26 | 15.16 |
| PGSC0003DMT400071606 | Potato | nucleus | 6.92 | 11.72 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400071173 | EnsemblPlantsGene:PGSC0003DMG402027680 | EntrezGene:102588565 | Gene3D:1.10.287.110 | InterPro:IPR036869 | InterPro:J_dom_sf |
| ncoils:Coil | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF54 | PGSC:PGSC0003DMG402027680 | RefSeq:XP_006366804.1 | RefSeq:XP_015160563.1 |
| SEG:seg | SUPFAM:SSF46565 | UniParc:UPI000295ECA2 | UniProt:M1CNB1 | MapMan:22.1.6.4 | : |
Description
Auxilin [Source:PGSC_GENE;Acc:PGSC0003DMG402027680]
Coordinates
chr6:-:57864189..57871210
Molecular Weight (calculated)
104918.0 Da
IEP (calculated)
6.778
GRAVY (calculated)
-1.038
Length
954 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDLDMLTRD YGFRPGGKSA PMRSDGGDRR SSSVRSSSSS PLYDDSDGLL YKDVFGGPPK YTKSSNNNSK SSSMNDINYD SIFNTGNDSN SYINNNKTSS
101: VPVYDKPVYD EDIFDGLPGL KNKSESEKSA STVRFDDNVF ATMTSPPQPK MKDEHFGDLL GNLKSNEKVT EPRSSTSSSA KEFDDLLAGF GSSTSTTNKR
201: SFTESSHYSK PTGNSNQSSI GLDDPFAGLG STSMPASSNP GEFMDPLEQI GQLGKSGNTH SEASSVSGGV LDDLDPLNGF SKSVPPLYSA RNNRGTGGSP
301: QRAGSGTSDT QASSSRENIG KSSDSRSQKK VPEDGFQDSP LFDMPSGDPQ RSFGPAGSPP SYASSNIHET HFESDTSPRS EDQMQPSDDV WLSVSEIPLF
401: TQPTRAPPPS RPPPPIPRRN FKSEASSFAS NARKKGDRYS SSPSYNQYSQ SPKVVRPAAK SPPTSQLDEL DEFAMGKSPH SVDESAGVLS GEDMNANSVA
501: AASAAAMKEA MDRAQAKFRH AKEVRERESA KAAKSKEAVN LDRDEQAMHE TQEKELRENK ERLERERQQR EKEEEERAQW KLERERERAR EVERDRGRQA
601: VERATREARE RAAADARERA AAAARLKTER AAVERAGAEA RERAERAAVQ RAQAEARERA SAEAKERAEK VAAEAREKEA REKASAAKAE AEVRRRAERA
701: AVERAAAEAR ERAAAAARMN QQKNDDDLES FFNMGSRANS APKTRTSSVN ETSFASQFQN KAGAGGSKPT FSSTTTSSNR TKASSTTSFA DDLSSIFGAA
801: TSSGDFQEVE GETEERRRAR LERHQRTQER AAKALAEKNQ RDLQVQMEQQ ERHRISETLD IEIKRWAAGK EGNLRALLST MQYVLWPECG WQPVSLTDLI
901: TGASVKKVYR KATLCIHPDK VQQKGATLQQ KYVAEKVFDM LKEAWNKFNS EELF
101: VPVYDKPVYD EDIFDGLPGL KNKSESEKSA STVRFDDNVF ATMTSPPQPK MKDEHFGDLL GNLKSNEKVT EPRSSTSSSA KEFDDLLAGF GSSTSTTNKR
201: SFTESSHYSK PTGNSNQSSI GLDDPFAGLG STSMPASSNP GEFMDPLEQI GQLGKSGNTH SEASSVSGGV LDDLDPLNGF SKSVPPLYSA RNNRGTGGSP
301: QRAGSGTSDT QASSSRENIG KSSDSRSQKK VPEDGFQDSP LFDMPSGDPQ RSFGPAGSPP SYASSNIHET HFESDTSPRS EDQMQPSDDV WLSVSEIPLF
401: TQPTRAPPPS RPPPPIPRRN FKSEASSFAS NARKKGDRYS SSPSYNQYSQ SPKVVRPAAK SPPTSQLDEL DEFAMGKSPH SVDESAGVLS GEDMNANSVA
501: AASAAAMKEA MDRAQAKFRH AKEVRERESA KAAKSKEAVN LDRDEQAMHE TQEKELRENK ERLERERQQR EKEEEERAQW KLERERERAR EVERDRGRQA
601: VERATREARE RAAADARERA AAAARLKTER AAVERAGAEA RERAERAAVQ RAQAEARERA SAEAKERAEK VAAEAREKEA REKASAAKAE AEVRRRAERA
701: AVERAAAEAR ERAAAAARMN QQKNDDDLES FFNMGSRANS APKTRTSSVN ETSFASQFQN KAGAGGSKPT FSSTTTSSNR TKASSTTSFA DDLSSIFGAA
801: TSSGDFQEVE GETEERRRAR LERHQRTQER AAKALAEKNQ RDLQVQMEQQ ERHRISETLD IEIKRWAAGK EGNLRALLST MQYVLWPECG WQPVSLTDLI
901: TGASVKKVYR KATLCIHPDK VQQKGATLQQ KYVAEKVFDM LKEAWNKFNS EELF
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFASAAGKK SDSLPVFDDL GRDGDDLLFR DVFSGPPPKY GSSGDSRSPS APAFDYDVMF
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
Arabidopsis Description
Auxilin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQ57]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.