Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G126200.1 | Wheat | nucleus | 95.8 | 90.36 |
| TraesCS4A01G169200.1 | Wheat | nucleus | 96.48 | 90.04 |
| PGSC0003DMT400052312 | Potato | cytosol | 10.56 | 89.42 |
| HORVU4Hr1G033280.4 | Barley | nucleus | 92.85 | 87.86 |
| VIT_00s0188g00150.t01 | Wine grape | cytosol | 4.43 | 84.78 |
| VIT_10s0116g01370.t01 | Wine grape | extracellular | 6.92 | 72.62 |
| Os11t0661200-01 | Rice | nucleus | 70.6 | 70.05 |
| EES08933 | Sorghum | nucleus, plastid | 71.51 | 69.31 |
| Zm00001d007692_P003 | Maize | plasma membrane | 67.54 | 67.08 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 9.99 | 54.32 |
| TraesCS5D01G104700.2 | Wheat | nucleus | 52.67 | 52.19 |
| GSMUA_Achr11P... | Banana | nucleus | 48.47 | 46.01 |
| CDY31429 | Canola | plastid | 40.07 | 43.26 |
| Bra020913.1-P | Field mustard | nucleus | 40.64 | 42.82 |
| CDX76445 | Canola | nucleus | 40.41 | 42.69 |
| KRH63993 | Soybean | nucleus, plastid | 44.15 | 42.65 |
| KRH53945 | Soybean | nucleus, plastid | 44.38 | 42.41 |
| KRH40961 | Soybean | endoplasmic reticulum | 44.49 | 41.97 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 45.52 | 41.86 |
| AT4G12770.1 | Thale cress | nucleus | 42.22 | 41.75 |
| AT4G12780.1 | Thale cress | nucleus | 42.11 | 41.04 |
| GSMUA_Achr3P24020_001 | Banana | nucleus | 37.0 | 40.85 |
| Solyc09g018960.2.1 | Tomato | nucleus | 42.45 | 40.61 |
| KRH59609 | Soybean | nucleus | 44.04 | 39.47 |
| PGSC0003DMT400071173 | Potato | nucleus | 42.34 | 39.1 |
| Solyc06g082840.2.1 | Tomato | nucleus | 41.66 | 38.11 |
| PGSC0003DMT400052311 | Potato | nucleus | 33.48 | 34.95 |
| TraesCS4D01G261900.1 | Wheat | nucleus, plastid | 11.92 | 16.33 |
| TraesCS1D01G427300.1 | Wheat | nucleus | 25.09 | 14.3 |
| TraesCS3D01G224500.1 | Wheat | nucleus | 23.84 | 13.81 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G145200.4 | EnsemblPlantsGene:TraesCS4D01G145200 | Gene3D:1.10.287.110 | InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil |
| PANTHER:PTHR23172 | PANTHER:PTHR23172:SF50 | SEG:seg | SUPFAM:SSF46565 | MapMan:22.1.6.4 | : |
Description
No Description!
Coordinates
chr4D:-:134140645..134145704
Molecular Weight (calculated)
96698.4 Da
IEP (calculated)
5.039
GRAVY (calculated)
-0.963
Length
881 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGIEGLLAR DFGVRPQGKA APMAAARGGG SAWPNPRSTP APSYDGLFGA PVPAASASGP PLDSIFDSFK GPSSSSAAAA GTKPLFDDDF FEPVRGTRAS
101: NSTYDSDGVF GTGAAAAPAY DVFTSSNRSA PPSYDDFLGG FGGKPQAEEI KRSVVVEDDD DLLGGFGMKP AREKKSVVEE DQQGNGFDDL IPGFASSSPP
201: KSRNTNEDNK KKPAVPASKS TASFVDDPFV VLERVPVPGS AYPSPGRFTD PLEDLDKSAN TEGKNVDSAA AADSLFEDSS AFDQAPKSDP LFTSEINGDT
301: KDSHLHSKSQ GSSSVQSSVK RNPASRSLED FGNDMPKPQS ARYSDIHVDD SSERYSGNGM DNQSPISTES EDDIWLTVSE IPLFTRPTSA PPPSRSPPLL
401: KQKPLGAKAN VEDDEYVSQS SQKHNQYKDT PEQADDSSVD ESEGVAMGKH QMPAYYDKNA FDDDEEFDSN SSAREERESQ ERLEHAREMR LREEQRRLEK
501: ERVLEQQREK QAVERATKEA RERAAAEARA KAERDARQRS QRAAVQRAHQ EARERAAAEA KDRVARAAAE ERERAAAEER ERAAAEARER ERTAARERAA
601: AERAAAERVQ QEARKRAERA VVERAAAEAR QRQAAAAAAA AKEKHSTPND VESFFRMDAR DTSAAKQRAP TPTADSMFDS QPQDRGTVNG SQRTASTSAS
701: TRKTNPPSAT NIFGNGLSDL FEFESTRSSS DAFQDVEGES EERRRARLER HQRTRERAAK ALAEKNERDM QVQREQAERD RIGDSLDFEI KRWAAGKEGN
801: LRALLSTLQY ILWPECGWQA VSLTDLITGA AVKKQYRKAT LCIHPDKVQQ KGATLQQKYI AEKVFDMLKE AWNKFNSEEL F
101: NSTYDSDGVF GTGAAAAPAY DVFTSSNRSA PPSYDDFLGG FGGKPQAEEI KRSVVVEDDD DLLGGFGMKP AREKKSVVEE DQQGNGFDDL IPGFASSSPP
201: KSRNTNEDNK KKPAVPASKS TASFVDDPFV VLERVPVPGS AYPSPGRFTD PLEDLDKSAN TEGKNVDSAA AADSLFEDSS AFDQAPKSDP LFTSEINGDT
301: KDSHLHSKSQ GSSSVQSSVK RNPASRSLED FGNDMPKPQS ARYSDIHVDD SSERYSGNGM DNQSPISTES EDDIWLTVSE IPLFTRPTSA PPPSRSPPLL
401: KQKPLGAKAN VEDDEYVSQS SQKHNQYKDT PEQADDSSVD ESEGVAMGKH QMPAYYDKNA FDDDEEFDSN SSAREERESQ ERLEHAREMR LREEQRRLEK
501: ERVLEQQREK QAVERATKEA RERAAAEARA KAERDARQRS QRAAVQRAHQ EARERAAAEA KDRVARAAAE ERERAAAEER ERAAAEARER ERTAARERAA
601: AERAAAERVQ QEARKRAERA VVERAAAEAR QRQAAAAAAA AKEKHSTPND VESFFRMDAR DTSAAKQRAP TPTADSMFDS QPQDRGTVNG SQRTASTSAS
701: TRKTNPPSAT NIFGNGLSDL FEFESTRSSS DAFQDVEGES EERRRARLER HQRTRERAAK ALAEKNERDM QVQREQAERD RIGDSLDFEI KRWAAGKEGN
801: LRALLSTLQY ILWPECGWQA VSLTDLITGA AVKKQYRKAT LCIHPDKVQQ KGATLQQKYI AEKVFDMLKE AWNKFNSEEL F
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFASAAGKK SDSLPVFDDL GRDGDDLLFR DVFSGPPPKY GSSGDSRSPS APAFDYDVMF
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
Arabidopsis Description
Auxilin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQ57]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.