Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0116g01370.t01 | Wine grape | extracellular | 97.83 | 53.57 |
| VIT_18s0001g01980.t01 | Wine grape | cytosol | 80.43 | 7.17 |
| HORVU5Hr1G024350.1 | Barley | plasma membrane | 93.48 | 5.83 |
| GSMUA_Achr3P24020_001 | Banana | nucleus | 91.3 | 5.26 |
| VIT_10s0003g04050.t01 | Wine grape | nucleus | 54.35 | 5.14 |
| Zm00001d041647_P004 | Maize | nucleus | 93.48 | 4.86 |
| TraesCS5D01G104700.2 | Wheat | nucleus | 93.48 | 4.84 |
| TraesCS5A01G092500.2 | Wheat | nucleus | 93.48 | 4.82 |
| TraesCS5B01G098600.2 | Wheat | nucleus | 93.48 | 4.82 |
| EES17168 | Sorghum | mitochondrion, nucleus | 93.48 | 4.79 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 95.65 | 4.59 |
| GSMUA_Achr1P26650_001 | Banana | nucleus | 86.96 | 4.56 |
| Os12t0548200-02 | Rice | plasma membrane | 91.3 | 4.54 |
| Zm00001d023838_P014 | Maize | mitochondrion, nucleus | 89.13 | 4.54 |
| GSMUA_Achr11P... | Banana | nucleus | 91.3 | 4.53 |
| TraesCS4D01G145200.4 | Wheat | nucleus | 84.78 | 4.43 |
| Zm00001d007692_P003 | Maize | plasma membrane | 84.78 | 4.4 |
| Os11t0661200-01 | Rice | nucleus | 84.78 | 4.39 |
| EES08933 | Sorghum | nucleus, plastid | 84.78 | 4.29 |
| HORVU4Hr1G033280.4 | Barley | nucleus | 84.78 | 4.19 |
| TraesCS4A01G169200.1 | Wheat | nucleus | 84.78 | 4.13 |
| TraesCS4B01G126200.1 | Wheat | nucleus | 80.43 | 3.96 |
| VIT_18s0001g12100.t01 | Wine grape | nucleus | 63.04 | 3.79 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 8.7 | 2.47 |
| VIT_04s0023g02070.t01 | Wine grape | nucleus | 76.09 | 2.41 |
| VIT_18s0001g12770.t01 | Wine grape | nucleus | 69.57 | 2.37 |
| GSMUA_Achr2P02260_001 | Banana | nucleus | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_00s0188g00150 | EMBL:FN596767 | EnsemblPlants:VIT_00s0188g00150.t01 | EnsemblPlantsGene:VIT_00s0188g00150 | Gene3D:1.10.287.110 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006898 | GO:GO:0008150 | GO:GO:0031982 | InterPro:IPR036869 | InterPro:J_dom_sf |
| PANTHER:PTHR23172 | PANTHER:PTHR23172:SF54 | ProteinID:CBI40910 | ProteinID:CBI40910.3 | SUPFAM:SSF46565 | UniParc:UPI0001BE54C1 |
| UniProt:D7UDU5 | MapMan:22.1.6.4 | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:9478520..9479389
Molecular Weight (calculated)
5217.5 Da
IEP (calculated)
10.482
GRAVY (calculated)
-0.298
Length
46 amino acids
Sequence
(BLAST)
(BLAST)
1: MITAASVKKV YRKATLCIHP DKVQQKGANL QQKYIAEKVF NLLKEA
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFATAAGKK SDSLPVFDDP GRDGDDLLFK DVFSGPPPPK YGSSSGDSRS PSAPAFDYDA
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KFNSRKTDHS SVHGGVFVDI DPLDNLGKPG PDMNSKGKSH
301: LRPPGNISGS QSPPVESPGS YHSKKVSFED FLEPHNMSTP PPTNSNGSFE SSDDVWLTVS EIPLFTQPTS APPPTRPPPP RPTRPIKKKV NEPSIPTSAY
401: HSHVPSSGRA SVNSPTASQM DELDDFSIGR NQTAANGYPD PSSGEDSDVF STAAASAAAM KDAMDKAEAK FRHAKERREK ENLKASRSRE GDHTENYDSR
501: ERELREKQVR LDRERAEREA EMEKAQEREK EEREREQKRI ERERERLVAR QAVERATREA RERAATEAHA KVQRAAVGKA TDARERAERA AVQRAHAEAR
601: ERAAAGARDK AAKAAAEARE KAEKAAAEAK ERANAEAREK ETRVRAERAA VERAAAEARG RAAAQAKAKQ QQENTNDLDS FFSSISRPNS APRQRTNPLD
701: PFQDSWNKGG SFESSRESLR VPPGQPENLR KTSSVTNIVD DLSSIFGASA SQSGGFQDVD GETEERRRAR LERHQRTQER AAKALAEKNE RDLQVQREQV
801: EKDRIGVTLD VEIKRWGAGK EGNLRALLST LQYVLWPECG WQPVSLTDLI TAASVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDM LKEAWNKFNS
901: EELF
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KFNSRKTDHS SVHGGVFVDI DPLDNLGKPG PDMNSKGKSH
301: LRPPGNISGS QSPPVESPGS YHSKKVSFED FLEPHNMSTP PPTNSNGSFE SSDDVWLTVS EIPLFTQPTS APPPTRPPPP RPTRPIKKKV NEPSIPTSAY
401: HSHVPSSGRA SVNSPTASQM DELDDFSIGR NQTAANGYPD PSSGEDSDVF STAAASAAAM KDAMDKAEAK FRHAKERREK ENLKASRSRE GDHTENYDSR
501: ERELREKQVR LDRERAEREA EMEKAQEREK EEREREQKRI ERERERLVAR QAVERATREA RERAATEAHA KVQRAAVGKA TDARERAERA AVQRAHAEAR
601: ERAAAGARDK AAKAAAEARE KAEKAAAEAK ERANAEAREK ETRVRAERAA VERAAAEARG RAAAQAKAKQ QQENTNDLDS FFSSISRPNS APRQRTNPLD
701: PFQDSWNKGG SFESSRESLR VPPGQPENLR KTSSVTNIVD DLSSIFGASA SQSGGFQDVD GETEERRRAR LERHQRTQER AAKALAEKNE RDLQVQREQV
801: EKDRIGVTLD VEIKRWGAGK EGNLRALLST LQYVLWPECG WQPVSLTDLI TAASVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDM LKEAWNKFNS
901: EELF
Arabidopsis Description
AUXI1Auxilin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.