Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G104700.2 | Wheat | nucleus | 98.54 | 98.88 |
| TraesCS5B01G098600.2 | Wheat | nucleus | 97.98 | 97.98 |
| PGSC0003DMT400052312 | Potato | cytosol | 10.99 | 94.23 |
| VIT_00s0188g00150.t01 | Wine grape | cytosol | 4.82 | 93.48 |
| HORVU5Hr1G024350.1 | Barley | plasma membrane | 76.68 | 92.68 |
| Os12t0548200-02 | Rice | plasma membrane | 81.5 | 78.59 |
| VIT_10s0116g01370.t01 | Wine grape | extracellular | 7.4 | 78.57 |
| EES17168 | Sorghum | mitochondrion, nucleus | 73.54 | 73.13 |
| Zm00001d041647_P004 | Maize | nucleus | 71.75 | 72.4 |
| Zm00001d023838_P014 | Maize | mitochondrion, nucleus | 71.08 | 70.21 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 10.65 | 58.64 |
| GSMUA_Achr11P... | Banana | nucleus | 55.04 | 52.91 |
| TraesCS4A01G169200.1 | Wheat | nucleus | 52.13 | 49.26 |
| KRH53945 | Soybean | nucleus, plastid | 50.78 | 49.13 |
| KRH63993 | Soybean | nucleus, plastid | 49.44 | 48.36 |
| KRH40961 | Soybean | endoplasmic reticulum | 50.45 | 48.18 |
| GSMUA_Achr3P24020_001 | Banana | nucleus | 42.94 | 47.99 |
| Solyc09g018960.2.1 | Tomato | nucleus | 49.33 | 47.77 |
| CDY31429 | Canola | plastid | 43.61 | 47.67 |
| Bra020913.1-P | Field mustard | nucleus | 44.28 | 47.25 |
| CDX76445 | Canola | nucleus | 43.95 | 47.0 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 50.45 | 46.97 |
| AT4G12770.1 | Thale cress | nucleus | 46.3 | 46.35 |
| Solyc06g082840.2.1 | Tomato | nucleus | 50.0 | 46.31 |
| PGSC0003DMT400071173 | Potato | nucleus | 49.22 | 46.02 |
| KRH59609 | Soybean | nucleus | 50.67 | 45.98 |
| AT4G12780.1 | Thale cress | nucleus | 45.85 | 45.24 |
| PGSC0003DMT400052311 | Potato | nucleus | 39.57 | 41.82 |
| TraesCS4A01G041000.2 | Wheat | nucleus, plastid | 12.44 | 17.48 |
| TraesCS3A01G226500.1 | Wheat | nucleus | 26.23 | 15.4 |
| TraesCS1A01G419500.1 | Wheat | nucleus | 23.54 | 15.25 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G092500.2 | EnsemblPlantsGene:TraesCS5A01G092500 | Gene3D:1.10.287.110 | InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil |
| PANTHER:PTHR23172 | PANTHER:PTHR23172:SF53 | SEG:seg | SUPFAM:SSF46565 | MapMan:22.1.6.4 | : |
Description
No Description!
Coordinates
chr5A:+:127979540..127986581
Molecular Weight (calculated)
98501.9 Da
IEP (calculated)
6.496
GRAVY (calculated)
-1.028
Length
892 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDFQGILAR DFGLRPKGKA APMSAARAAP SSGSGWDSTR SAAAAVPSAP SYDDLFGAPS SAPPPKPTQS TSIDSIFDSF AEPSASAAPP KPKHSSMPVF
101: DKPVYDDDIF DGVPGVKSSS VRYDDVFAGN HAPAPADDDL LAGFGTKSEA REVPEDKWKP GPAAASAGFD DLFAGIGRSS PVKQRQTAGA KEKKVPTSQP
201: ASMASDPFVS FETTSTSARQ SSGIFSDPLD ELGRHSKSQV KTAADSGLFE DSSAFNQVPK SEPLFTTNLS DDSKGSNGST KARDSSPVQN FPKRNSAQQP
301: SVEDFENIFP QSQSARYSDV HVDSGAPGSE KYNGNGMDDR SPRSDESEDE IWLTVSEIPL FTQPTSAPPP SRPPPSLAIK QKPHGSRAKR RDDDYLRHST
401: QNYNHNKSSS MDELEEFAMG KPQKSAYDSA NPFYEDESER NSSAAASAAA MKEAMDKAEA KFKHAKEVRE RERDAKLRNR EQQEQDDEAR SYAQDQEERE
501: RQEKLDREKE MRQREEKERE QRRLEEAREL EQQRERGRGR QAVERATKEA RERAAIEARA KAEREARLRN ERAAVQRAQQ EARERAAVDA RDRADRAAAE
601: AKEKAAAQTR ERATAERAAV ERVQQDAKRR ADRAAVEKAA AEVRERQAAE ARERHAASAA AAAAREKQSK PDDLESFFGM GARANSAPKQ RAPTVDPTFN
701: AQSQSRAAAT SASASSMRKA SSTTNFTDDL SAIFGGAPTP SDEFQAVEGE SEERRRARLE RHQRTRERAA KALAEKNERD MNVQREQAER DRISESLDFE
801: IKRWAAGKEG NLRALLSTMQ YVLWPECGWQ PVSLTDLITA AAVKKVYRKA TLCIHPDKVQ QKGANLQQKY IAEKVFDLLK EAWNKFNSEE LF
101: DKPVYDDDIF DGVPGVKSSS VRYDDVFAGN HAPAPADDDL LAGFGTKSEA REVPEDKWKP GPAAASAGFD DLFAGIGRSS PVKQRQTAGA KEKKVPTSQP
201: ASMASDPFVS FETTSTSARQ SSGIFSDPLD ELGRHSKSQV KTAADSGLFE DSSAFNQVPK SEPLFTTNLS DDSKGSNGST KARDSSPVQN FPKRNSAQQP
301: SVEDFENIFP QSQSARYSDV HVDSGAPGSE KYNGNGMDDR SPRSDESEDE IWLTVSEIPL FTQPTSAPPP SRPPPSLAIK QKPHGSRAKR RDDDYLRHST
401: QNYNHNKSSS MDELEEFAMG KPQKSAYDSA NPFYEDESER NSSAAASAAA MKEAMDKAEA KFKHAKEVRE RERDAKLRNR EQQEQDDEAR SYAQDQEERE
501: RQEKLDREKE MRQREEKERE QRRLEEAREL EQQRERGRGR QAVERATKEA RERAAIEARA KAEREARLRN ERAAVQRAQQ EARERAAVDA RDRADRAAAE
601: AKEKAAAQTR ERATAERAAV ERVQQDAKRR ADRAAVEKAA AEVRERQAAE ARERHAASAA AAAAREKQSK PDDLESFFGM GARANSAPKQ RAPTVDPTFN
701: AQSQSRAAAT SASASSMRKA SSTTNFTDDL SAIFGGAPTP SDEFQAVEGE SEERRRARLE RHQRTRERAA KALAEKNERD MNVQREQAER DRISESLDFE
801: IKRWAAGKEG NLRALLSTMQ YVLWPECGWQ PVSLTDLITA AAVKKVYRKA TLCIHPDKVQ QKGANLQQKY IAEKVFDLLK EAWNKFNSEE LF
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFASAAGKK SDSLPVFDDL GRDGDDLLFR DVFSGPPPKY GSSGDSRSPS APAFDYDVMF
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
Arabidopsis Description
Auxilin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQ57]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.