Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400052312 | Potato | cytosol | 10.97 | 97.12 |
| PGSC0003DMT400052311 | Potato | nucleus | 72.96 | 79.62 |
| Solyc06g082840.2.1 | Tomato | nucleus | 67.32 | 64.38 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 11.18 | 63.58 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 58.31 | 56.05 |
| GSMUA_Achr2P02260_001 | Banana | nucleus | 16.61 | 55.23 |
| KRH40961 | Soybean | endoplasmic reticulum | 55.05 | 54.28 |
| KRH53945 | Soybean | nucleus, plastid | 53.96 | 53.9 |
| KRH63993 | Soybean | nucleus, plastid | 52.55 | 53.07 |
| KRH59609 | Soybean | nucleus | 55.16 | 51.68 |
| CDY31429 | Canola | plastid | 45.49 | 51.35 |
| HORVU5Hr1G024350.1 | Barley | plasma membrane | 41.04 | 51.22 |
| AT4G12770.1 | Thale cress | nucleus | 49.19 | 50.84 |
| Bra020913.1-P | Field mustard | nucleus | 45.93 | 50.6 |
| EES17168 | Sorghum | mitochondrion, nucleus | 49.08 | 50.39 |
| CDX76445 | Canola | nucleus | 45.49 | 50.24 |
| GSMUA_Achr11P... | Banana | nucleus | 50.38 | 50.0 |
| AT4G12780.1 | Thale cress | nucleus | 49.08 | 50.0 |
| Os12t0548200-02 | Rice | plasma membrane | 49.95 | 49.73 |
| TraesCS5D01G104700.2 | Wheat | nucleus | 47.99 | 49.72 |
| TraesCS5A01G092500.2 | Wheat | nucleus | 47.77 | 49.33 |
| Zm00001d041647_P004 | Maize | nucleus | 47.34 | 49.32 |
| GSMUA_Achr3P24020_001 | Banana | nucleus | 42.45 | 49.0 |
| TraesCS5B01G098600.2 | Wheat | nucleus | 47.34 | 48.88 |
| Zm00001d023838_P014 | Maize | mitochondrion, nucleus | 47.34 | 48.28 |
| GSMUA_Achr1P26650_001 | Banana | nucleus | 45.6 | 47.84 |
| Os11t0661200-01 | Rice | nucleus | 42.78 | 44.37 |
| EES08933 | Sorghum | nucleus, plastid | 42.78 | 43.34 |
| Zm00001d007692_P003 | Maize | plasma membrane | 40.93 | 42.5 |
| TraesCS4D01G145200.4 | Wheat | nucleus | 40.61 | 42.45 |
| Solyc06g060090.2.1 | Tomato | nucleus | 22.04 | 41.68 |
| HORVU4Hr1G033280.4 | Barley | nucleus | 40.5 | 40.06 |
| TraesCS4A01G169200.1 | Wheat | nucleus | 40.39 | 39.41 |
| TraesCS4B01G126200.1 | Wheat | nucleus | 39.52 | 38.97 |
| Solyc02g085030.2.1 | Tomato | nucleus | 26.38 | 17.3 |
| Solyc04g080040.2.1 | Tomato | nucleus | 12.27 | 15.61 |
| Solyc04g080600.2.1 | Tomato | nucleus | 25.41 | 15.49 |
Protein Annotations
| EnsemblPlants:Solyc09g018960.2.1 | EnsemblPlantsGene:Solyc09g018960.2 | Gene3D:1.10.287.110 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006898 |
| GO:GO:0008150 | GO:GO:0031982 | InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR23172 |
| PANTHER:PTHR23172:SF54 | SEG:seg | SUPFAM:SSF46565 | UniParc:UPI000276C4E1 | UniProt:K4CSF7 | MapMan:22.1.6.4 |
Description
No Description!
Coordinates
chr9:-:17739610..17753558
Molecular Weight (calculated)
101883.0 Da
IEP (calculated)
5.972
GRAVY (calculated)
-0.974
Length
921 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDLDVLARD LGFRHAGKSA PMRSDIRSTS SSDPDPMLFN VFGGPPKYTK TNNSADYNYD SIFVSAKNNN NNDDNIKTSS FPVNDKPVYD DDIFDGLPGV
101: KSKALSSSST LRFEDDVFAT MTSPPQQNIH FDDLLGNLGR NEKVAQPKSS VGSTEFDDLL AGFGTGTSSR SFTDSTYPSK PAENSNKSSS MLDDPFVVLE
201: STSVPANSSG GEFSDPLEEI GKLGKSGMAK TGASSVSGGV FDDFNKPVRP FSPEKKTGGK DRSPSKAGAG RSDAHNSPSR ENIETPPFRY SESHSQKKVP
301: GDSFQESPHF NMSSEDPLRS LGEAAPLNAD NDLHETNFQV DTSPRSEDQV QASEDSWLTV SEIPLFTQPT SAPPPSRPPP PIPRRCSKSE ASFSASNARK
401: GEGYSSSPNH YQYSQSPKRV RPAVKSPPVS QLDELEDFAR GWSKSSIDEN ADALSGEDMN GNSVAAASAA AMKEVMDRAE AKFRHAKEVR EREYAKSAKS
501: KEAVHLERDE QAINEVQERE FQGNRERLEN ERRQWEKEEE ERAQKKLERE RERSRELEKE RARQAVERAT REARERAEAG ARDRAAAETR LKAERAAVEK
601: AAAEARGRAE KAAVQRAQAE ARERAAADAK ERAEKAAAEA REKEAREKAF AAMAEAEARR RAERAAVERA AAEARERAAA EARERAAASA RMNQQRNDND
701: LESFFSMGRA SSAPKTRTSD NIFDSPFQNK AGPEGPKSTA GVASSNIRKA SSTTSFVDDL SSIFGASASS GEFQGVEGET EERRRARLER HQRTQERAAK
801: ALAEKNQRDL QVQRDQEERH RISETLDFEI KRWAAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLIMDA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI
901: AEKVFDLLKE AWNKFNSEEL F
101: KSKALSSSST LRFEDDVFAT MTSPPQQNIH FDDLLGNLGR NEKVAQPKSS VGSTEFDDLL AGFGTGTSSR SFTDSTYPSK PAENSNKSSS MLDDPFVVLE
201: STSVPANSSG GEFSDPLEEI GKLGKSGMAK TGASSVSGGV FDDFNKPVRP FSPEKKTGGK DRSPSKAGAG RSDAHNSPSR ENIETPPFRY SESHSQKKVP
301: GDSFQESPHF NMSSEDPLRS LGEAAPLNAD NDLHETNFQV DTSPRSEDQV QASEDSWLTV SEIPLFTQPT SAPPPSRPPP PIPRRCSKSE ASFSASNARK
401: GEGYSSSPNH YQYSQSPKRV RPAVKSPPVS QLDELEDFAR GWSKSSIDEN ADALSGEDMN GNSVAAASAA AMKEVMDRAE AKFRHAKEVR EREYAKSAKS
501: KEAVHLERDE QAINEVQERE FQGNRERLEN ERRQWEKEEE ERAQKKLERE RERSRELEKE RARQAVERAT REARERAEAG ARDRAAAETR LKAERAAVEK
601: AAAEARGRAE KAAVQRAQAE ARERAAADAK ERAEKAAAEA REKEAREKAF AAMAEAEARR RAERAAVERA AAEARERAAA EARERAAASA RMNQQRNDND
701: LESFFSMGRA SSAPKTRTSD NIFDSPFQNK AGPEGPKSTA GVASSNIRKA SSTTSFVDDL SSIFGASASS GEFQGVEGET EERRRARLER HQRTQERAAK
801: ALAEKNQRDL QVQRDQEERH RISETLDFEI KRWAAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLIMDA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI
901: AEKVFDLLKE AWNKFNSEEL F
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFATAAGKK SDSLPVFDDP GRDGDDLLFK DVFSGPPPPK YGSSSGDSRS PSAPAFDYDA
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KFNSRKTDHS SVHGGVFVDI DPLDNLGKPG PDMNSKGKSH
301: LRPPGNISGS QSPPVESPGS YHSKKVSFED FLEPHNMSTP PPTNSNGSFE SSDDVWLTVS EIPLFTQPTS APPPTRPPPP RPTRPIKKKV NEPSIPTSAY
401: HSHVPSSGRA SVNSPTASQM DELDDFSIGR NQTAANGYPD PSSGEDSDVF STAAASAAAM KDAMDKAEAK FRHAKERREK ENLKASRSRE GDHTENYDSR
501: ERELREKQVR LDRERAEREA EMEKAQEREK EEREREQKRI ERERERLVAR QAVERATREA RERAATEAHA KVQRAAVGKA TDARERAERA AVQRAHAEAR
601: ERAAAGARDK AAKAAAEARE KAEKAAAEAK ERANAEAREK ETRVRAERAA VERAAAEARG RAAAQAKAKQ QQENTNDLDS FFSSISRPNS APRQRTNPLD
701: PFQDSWNKGG SFESSRESLR VPPGQPENLR KTSSVTNIVD DLSSIFGASA SQSGGFQDVD GETEERRRAR LERHQRTQER AAKALAEKNE RDLQVQREQV
801: EKDRIGVTLD VEIKRWGAGK EGNLRALLST LQYVLWPECG WQPVSLTDLI TAASVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDM LKEAWNKFNS
901: EELF
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KFNSRKTDHS SVHGGVFVDI DPLDNLGKPG PDMNSKGKSH
301: LRPPGNISGS QSPPVESPGS YHSKKVSFED FLEPHNMSTP PPTNSNGSFE SSDDVWLTVS EIPLFTQPTS APPPTRPPPP RPTRPIKKKV NEPSIPTSAY
401: HSHVPSSGRA SVNSPTASQM DELDDFSIGR NQTAANGYPD PSSGEDSDVF STAAASAAAM KDAMDKAEAK FRHAKERREK ENLKASRSRE GDHTENYDSR
501: ERELREKQVR LDRERAEREA EMEKAQEREK EEREREQKRI ERERERLVAR QAVERATREA RERAATEAHA KVQRAAVGKA TDARERAERA AVQRAHAEAR
601: ERAAAGARDK AAKAAAEARE KAEKAAAEAK ERANAEAREK ETRVRAERAA VERAAAEARG RAAAQAKAKQ QQENTNDLDS FFSSISRPNS APRQRTNPLD
701: PFQDSWNKGG SFESSRESLR VPPGQPENLR KTSSVTNIVD DLSSIFGASA SQSGGFQDVD GETEERRRAR LERHQRTQER AAKALAEKNE RDLQVQREQV
801: EKDRIGVTLD VEIKRWGAGK EGNLRALLST LQYVLWPECG WQPVSLTDLI TAASVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDM LKEAWNKFNS
901: EELF
Arabidopsis Description
AUXI1Auxilin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.