Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G145200.4 | Wheat | nucleus | 87.86 | 92.85 |
| TraesCS4B01G126200.1 | Wheat | nucleus | 90.44 | 90.15 |
| PGSC0003DMT400052312 | Potato | cytosol | 9.99 | 89.42 |
| TraesCS4A01G169200.1 | Wheat | nucleus | 90.23 | 88.98 |
| VIT_00s0188g00150.t01 | Wine grape | cytosol | 4.19 | 84.78 |
| VIT_10s0116g01370.t01 | Wine grape | extracellular | 6.55 | 72.62 |
| Os11t0661200-01 | Rice | nucleus | 66.17 | 69.37 |
| EES08933 | Sorghum | nucleus, plastid | 66.27 | 67.88 |
| Zm00001d007692_P003 | Maize | plasma membrane | 62.41 | 65.5 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 9.34 | 53.7 |
| HORVU5Hr1G024350.1 | Barley | plasma membrane | 42.43 | 53.52 |
| GSMUA_Achr11P... | Banana | nucleus | 44.58 | 44.72 |
| CDY31429 | Canola | plastid | 37.49 | 42.77 |
| KRH63993 | Soybean | nucleus, plastid | 41.57 | 42.43 |
| CDX76445 | Canola | nucleus | 37.92 | 42.33 |
| KRH53945 | Soybean | nucleus, plastid | 41.78 | 42.19 |
| Bra020913.1-P | Field mustard | nucleus | 37.81 | 42.11 |
| KRH40961 | Soybean | endoplasmic reticulum | 42.0 | 41.86 |
| GSMUA_Achr3P24020_001 | Banana | nucleus | 35.34 | 41.23 |
| AT4G12770.1 | Thale cress | nucleus | 39.42 | 41.19 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 42.32 | 41.13 |
| Solyc09g018960.2.1 | Tomato | nucleus | 40.06 | 40.5 |
| AT4G12780.1 | Thale cress | nucleus | 39.1 | 40.27 |
| KRH59609 | Soybean | nucleus | 42.0 | 39.78 |
| PGSC0003DMT400071173 | Potato | nucleus | 40.17 | 39.2 |
| Solyc06g082840.2.1 | Tomato | nucleus | 39.53 | 38.21 |
| PGSC0003DMT400052311 | Potato | nucleus | 31.36 | 34.6 |
| HORVU4Hr1G070720.5 | Barley | mitochondrion | 10.63 | 14.58 |
| HORVU1Hr1G091570.1 | Barley | nucleus | 23.2 | 14.36 |
| HORVU3Hr1G056550.8 | Barley | cytosol | 22.34 | 13.07 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G033280.4 | EnsemblPlantsGene:HORVU4Hr1G033280 | Gene3D:1.10.287.110 | InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil |
| PANTHER:PTHR23172 | PANTHER:PTHR23172:SF50 | SEG:seg | SUPFAM:SSF46565 | UniParc:UPI000294E06B | UniProt:M0UUX1 |
| MapMan:22.1.6.4 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:232453346..232459331
Molecular Weight (calculated)
102216.0 Da
IEP (calculated)
5.484
GRAVY (calculated)
-0.934
Length
931 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTSGGLHPS YTDRVTERTN KEGERHITTF LPFPTTFSLP ISPPSPLRRG RRRHSPAMDG IEGLLARDFG VRPQGKAAPM AAARGGGPAW PNPRSTPAPS
101: YDGLFGAPIP AASASGPPLG SIFDSFKGLS SSSSSAAGTK PVFDDDFFEP VRGLRASNST YDSDGVFGMG APSAAPAYDV FTSSNRSAPP SYGDFLGGFG
201: GKPQAEEIKS VVVEDDDDLL GGFGMKPAGE KKKSVVEEDQ QGTGFDDLIP GFASSSPPKS RNPNDDNKKK PAVPASKSTT SFVDDPFVVL ERVSVPGSAC
301: PSPGRFTDPL EDLDKSDNTE GKNVDSDAAA DSLFEDSSAF NQVPKSDPSF TSEINGDTKN SHLQSKAQES SSVQSSVKRN PASRSSLEDF RNGMPKSQSA
401: RYSDIHVDDI SERYSGNGMD DQSPISTESE DDIWLTVSEI PLFTRPTSAP PPSKSPPLLK QKPLGAKANG EDDEYVLRSS QKHNHYKDTP EQADDSSVDE
501: SEGVAMGKHQ MPAYYDKNAF DDDEEFDSNS SAREERESQE RLEHAREMRL REEQRRLEKE RVLEQQREKQ AVERATKEAR ERAVAEARAK AERDARQRSQ
601: RAAVQRAHQE ARERAAAEAK DRVARAAAEE RERAAAEARE RERTAARERA AAEGAAAERV QQEARKRAER AAVERAAAEA RQRQAAAAAA AKEKQSTPND
701: VESFFRMDAR DTSAAKQRGP TPTVDSMFDS QPQGRGTVNG SQRTTSTLAS TRKANPPPAT NIFGNGLSDL FEFESTRSSS DVFQDVEGES EERRRARSER
801: HQRTRERAAK ALAEKNERDM QVQREQAERD RIGDSLDFEI KRWAAGKEGN LRALLSTLQY ILWPECGWQA VSLTDLITGA SVKKQYRKAT LCIHPDKVQQ
901: KGATLQQKYI AEMVFDMLKE AWNKFNSEEL F
101: YDGLFGAPIP AASASGPPLG SIFDSFKGLS SSSSSAAGTK PVFDDDFFEP VRGLRASNST YDSDGVFGMG APSAAPAYDV FTSSNRSAPP SYGDFLGGFG
201: GKPQAEEIKS VVVEDDDDLL GGFGMKPAGE KKKSVVEEDQ QGTGFDDLIP GFASSSPPKS RNPNDDNKKK PAVPASKSTT SFVDDPFVVL ERVSVPGSAC
301: PSPGRFTDPL EDLDKSDNTE GKNVDSDAAA DSLFEDSSAF NQVPKSDPSF TSEINGDTKN SHLQSKAQES SSVQSSVKRN PASRSSLEDF RNGMPKSQSA
401: RYSDIHVDDI SERYSGNGMD DQSPISTESE DDIWLTVSEI PLFTRPTSAP PPSKSPPLLK QKPLGAKANG EDDEYVLRSS QKHNHYKDTP EQADDSSVDE
501: SEGVAMGKHQ MPAYYDKNAF DDDEEFDSNS SAREERESQE RLEHAREMRL REEQRRLEKE RVLEQQREKQ AVERATKEAR ERAVAEARAK AERDARQRSQ
601: RAAVQRAHQE ARERAAAEAK DRVARAAAEE RERAAAEARE RERTAARERA AAEGAAAERV QQEARKRAER AAVERAAAEA RQRQAAAAAA AKEKQSTPND
701: VESFFRMDAR DTSAAKQRGP TPTVDSMFDS QPQGRGTVNG SQRTTSTLAS TRKANPPPAT NIFGNGLSDL FEFESTRSSS DVFQDVEGES EERRRARSER
801: HQRTRERAAK ALAEKNERDM QVQREQAERD RIGDSLDFEI KRWAAGKEGN LRALLSTLQY ILWPECGWQA VSLTDLITGA SVKKQYRKAT LCIHPDKVQQ
901: KGATLQQKYI AEMVFDMLKE AWNKFNSEEL F
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFASAAGKK SDSLPVFDDL GRDGDDLLFR DVFSGPPPKY GSSGDSRSPS APAFDYDVMF
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
Arabidopsis Description
Auxilin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQ57]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.