Factsheet for VIT_10s0116g01370.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0188g00150.t01	Wine grape	cytosol	53.57	97.83
VIT_18s0001g01980.t01	Wine grape	cytosol	66.67	10.85
HORVU5Hr1G024350.1	Barley	plasma membrane	78.57	8.94
GSMUA_Achr3P24020_001	Banana	nucleus	76.19	8.02
Zm00001d041647_P004	Maize	nucleus	78.57	7.47
TraesCS5D01G104700.2	Wheat	nucleus	78.57	7.42
TraesCS5A01G092500.2	Wheat	nucleus	78.57	7.4
EES17168	Sorghum	mitochondrion, nucleus	78.57	7.36
GSMUA_Achr1P26650_001	Banana	nucleus	76.19	7.29
TraesCS5B01G098600.2	Wheat	nucleus	77.38	7.29
VIT_10s0003g04050.t01	Wine grape	nucleus	41.67	7.2
VIT_07s0031g02350.t01	Wine grape	nucleus, plastid	80.95	7.1
Zm00001d023838_P014	Maize	mitochondrion, nucleus	76.19	7.09
Os12t0548200-02	Rice	plasma membrane	77.38	7.03
GSMUA_Achr11P...	Banana	nucleus	77.38	7.0
TraesCS4D01G145200.4	Wheat	nucleus	72.62	6.92
Zm00001d007692_P003	Maize	plasma membrane	72.62	6.88
Os11t0661200-01	Rice	nucleus	72.62	6.87
EES08933	Sorghum	nucleus, plastid	72.62	6.71
HORVU4Hr1G033280.4	Barley	nucleus	72.62	6.55
TraesCS4A01G169200.1	Wheat	nucleus	72.62	6.46
TraesCS4B01G126200.1	Wheat	nucleus	70.24	6.32
VIT_00s0188g00210.t01	Wine grape	plastid	11.9	6.17
VIT_18s0001g12100.t01	Wine grape	nucleus	48.81	5.35
GSMUA_Achr2P02260_001	Banana	nucleus	14.29	4.33
VIT_04s0023g02070.t01	Wine grape	nucleus	57.14	3.3
VIT_18s0001g12770.t01	Wine grape	nucleus	50.0	3.11

Protein Annotations

ArrayExpress:VIT_10s0116g01370	EMBL:FN594953	EnsemblPlants:VIT_10s0116g01370.t01	EnsemblPlantsGene:VIT_10s0116g01370	Gene3D:1.10.287.110	GO:GO:0005575
GO:GO:0006810	GO:GO:0006898	GO:GO:0008150	GO:GO:0031982	InterPro:IPR036869	InterPro:J_dom_sf
PANTHER:PTHR23172	PANTHER:PTHR23172:SF54	ProteinID:CBI16782	ProteinID:CBI16782.3	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF46565	UniParc:UPI0001BE1049	UniProt:D7SMA3	MapMan:22.1.6.4	:	:

Description

No Description!

Coordinates

chr10_random:+:725404..726593

Molecular Weight (calculated)

9777.1 Da

IEP (calculated)

10.032

GRAVY (calculated)

0.123

Length

84 amino acids

Sequence
(BLAST)

1: MPLRFFSLFL LFHHLWFIPD HGIVLWPECG WQPVSLTNLI TAASVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFNL LKEA

Best Arabidopsis Sequence Match ( AT4G12780.3 )
(BLAST)

001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFATAAGKK SDSLPVFDDP GRDGDDLLFK DVFSGPPPPK YGSSSGDSRS PSAPAFDYDA
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KPGPDMNSKG KSHLRPPGNI SGSQSPPVES PGSYHSKKVS
301: FEDFLEPHNM STPPPTNSNG SFESSDDVWL TVSEIPLFTQ PTSAPPPTRP PPPRPTRPIK KKVNEPSIPT SAYHSHVPSS GRASVNSPTA SQMDELDDFS
401: IGRNQTAANG YPDPSSGEDS DVFSTAAASA AAMKDAMDKA EAKFRHAKER REKENLKASR SREGDHTENY DSRERELREK QVRLDRERAE REAEMEKAQE
501: REKEEREREQ KRIERERERL VARQAVERAT REARERAATE AHAKVQRAAV GKATDARERA ERAAVQRAHA EARERAAAGA RDKAAKAAAE AREKAEKAAA
601: EAKERANAEA REKETRVRAE RAAVERAAAE ARGRAAAQAK AKQQQENTND LDSFFSSISR PNSAPRQRTN PLDPFQDSWN KGGSFESSRE SLRVPPGQPE
701: NLRKTSSVTN IVDDLSSIFG ASASQSGGFQ DVDGETEERR RARLERHQRT QERAAKALAE KNERDLQVQR EQVEKDRIGV TLDVEIKRWG AGKEGNLRAL
801: LSTLQYVLWP ECGWQPVSLT DLITAASVKK VYRKATLCIH PDKVQQKGAN LQQKYIAEKV FDMLKEAWNK FNSEELF

Arabidopsis Description

AUXI1Auxilin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU08]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.