Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0188g00150.t01 | Wine grape | cytosol | 4.54 | 89.13 |
| EES17168 | Sorghum | mitochondrion, nucleus | 87.71 | 88.29 |
| Zm00001d041647_P004 | Maize | nucleus | 86.05 | 87.9 |
| PGSC0003DMT400052312 | Potato | cytosol | 9.75 | 84.62 |
| VIT_10s0116g01370.t01 | Wine grape | extracellular | 7.09 | 76.19 |
| Os12t0548200-02 | Rice | plasma membrane | 75.42 | 73.62 |
| TraesCS5D01G104700.2 | Wheat | nucleus | 70.1 | 71.2 |
| HORVU5Hr1G024350.1 | Barley | plasma membrane | 58.14 | 71.14 |
| TraesCS5B01G098600.2 | Wheat | nucleus | 70.21 | 71.08 |
| TraesCS5A01G092500.2 | Wheat | nucleus | 70.21 | 71.08 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 10.41 | 58.02 |
| Zm00001d007692_P003 | Maize | plasma membrane | 52.16 | 53.1 |
| GSMUA_Achr11P... | Banana | nucleus | 52.82 | 51.4 |
| KRH53945 | Soybean | nucleus, plastid | 50.39 | 49.35 |
| KRH63993 | Soybean | nucleus, plastid | 48.62 | 48.14 |
| KRH40961 | Soybean | endoplasmic reticulum | 49.72 | 48.07 |
| Solyc09g018960.2.1 | Tomato | nucleus | 48.28 | 47.34 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 49.72 | 46.87 |
| CDY31429 | Canola | plastid | 42.08 | 46.57 |
| GSMUA_Achr3P24020_001 | Banana | nucleus | 41.09 | 46.49 |
| CDX76445 | Canola | nucleus | 42.3 | 45.8 |
| Bra020913.1-P | Field mustard | nucleus | 42.3 | 45.69 |
| KRH59609 | Soybean | nucleus | 49.72 | 45.68 |
| AT4G12770.1 | Thale cress | nucleus | 44.19 | 44.78 |
| AT4G12780.1 | Thale cress | nucleus | 44.52 | 44.47 |
| PGSC0003DMT400071173 | Potato | nucleus | 46.51 | 44.03 |
| Solyc06g082840.2.1 | Tomato | nucleus | 46.84 | 43.93 |
| PGSC0003DMT400052311 | Potato | nucleus | 38.98 | 41.71 |
| Zm00001d040795_P002 | Maize | cytosol | 35.22 | 34.6 |
| Zm00001d048175_P002 | Maize | nucleus | 11.18 | 16.95 |
| Zm00001d039120_P002 | Maize | nucleus | 27.35 | 16.25 |
| Zm00001d044121_P002 | Maize | nucleus | 25.14 | 14.35 |
Protein Annotations
| EnsemblPlants:Zm00001d023838_P014 | EnsemblPlants:Zm00001d023838_T014 | EnsemblPlantsGene:Zm00001d023838 | EntrezGene:103640949 | Gene3D:1.10.287.110 | InterPro:IPR036869 |
| InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF53 | ProteinID:AQK40208.1 | SEG:seg |
| SUPFAM:SSF46565 | UniParc:UPI000842C9BD | UniProt:A0A1D6IW80 | MapMan:22.1.6.4 | : | : |
Description
Auxilin-related protein 1
Coordinates
chr10:-:23887483..23897354
Molecular Weight (calculated)
100697.0 Da
IEP (calculated)
8.888
GRAVY (calculated)
-1.058
Length
903 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDFQGLLAR DFGLRPQGKA APMSAARSSS PSGSAWTNTR SAVGSAAPSA PSYDELFGSA PPPPPKATPS LDNIFNSFKE PASTAPPPKP KHSSAPVFDK
101: PVYDDDIFIG VPGVKSSSVP YDDVFGGSQS REAPPAFDDL LGGFGKSSQV REEVDDKRKP EAPTAVAATG FDYLIPSFGG RSSPRQRDAI GAKQKKVSMS
201: TSKQSASLSD PFVVLETTSS SAHPFADPLD ESGKAAKYQG KNRESTSVGS SLFEDSSTFN QAPKFEPFFT PEVDNGSKDR NESSRAQNSN PVQDFSKRNS
301: SQQPSVEDFE NIFPKSQSAR YSDVHVDIGS EKYSGNGIND QSPRSDESED EIWLTASEIP LFTQPTSAPP PSRPPPPLAV KQKHGSRSTR KDEHLRRSRK
401: NNDHQRSFSN QAGVSTVDGL EDFTMGKSQN VHTFNEEEFE RSTAAAAMKE AMDKAEAKFK HAKEVRERER DAKLRNREQQ ERDNVIRSYA QDREDKERNE
501: RLEQEREMKQ KEEKEREQRR LEEERELERH RERERARQAV ERATKEARER AASEARAKAE REARKRSERA AVQRAQQEAR ERAAADAKDR AERATAEANE
601: RAATEAKEKA ASQARDRAAA EKAAVERAQQ EVRKRAERAA VERAAAEARE RQAAAAAAAR EKTSKPDDLE SLFGMGARAN SAPKQRAPTV DSMFDSQTQN
701: RGTSTSTSMK KASSTANVAD DLSALFGGAP TSSNEFQEVD GESEERRRAR LERHQRTRER AAKALAEKNE RDMQQQRDQA ERHRLAETLD FEIKRWAAGK
801: EGNLRALLST LQYVLWPECG WQPVSLTDLI TAAAVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDL LKAYMPTWFQ DSKNFSFSDI KKTYELDRCH
901: LFC
101: PVYDDDIFIG VPGVKSSSVP YDDVFGGSQS REAPPAFDDL LGGFGKSSQV REEVDDKRKP EAPTAVAATG FDYLIPSFGG RSSPRQRDAI GAKQKKVSMS
201: TSKQSASLSD PFVVLETTSS SAHPFADPLD ESGKAAKYQG KNRESTSVGS SLFEDSSTFN QAPKFEPFFT PEVDNGSKDR NESSRAQNSN PVQDFSKRNS
301: SQQPSVEDFE NIFPKSQSAR YSDVHVDIGS EKYSGNGIND QSPRSDESED EIWLTASEIP LFTQPTSAPP PSRPPPPLAV KQKHGSRSTR KDEHLRRSRK
401: NNDHQRSFSN QAGVSTVDGL EDFTMGKSQN VHTFNEEEFE RSTAAAAMKE AMDKAEAKFK HAKEVRERER DAKLRNREQQ ERDNVIRSYA QDREDKERNE
501: RLEQEREMKQ KEEKEREQRR LEEERELERH RERERARQAV ERATKEARER AASEARAKAE REARKRSERA AVQRAQQEAR ERAAADAKDR AERATAEANE
601: RAATEAKEKA ASQARDRAAA EKAAVERAQQ EVRKRAERAA VERAAAEARE RQAAAAAAAR EKTSKPDDLE SLFGMGARAN SAPKQRAPTV DSMFDSQTQN
701: RGTSTSTSMK KASSTANVAD DLSALFGGAP TSSNEFQEVD GESEERRRAR LERHQRTRER AAKALAEKNE RDMQQQRDQA ERHRLAETLD FEIKRWAAGK
801: EGNLRALLST LQYVLWPECG WQPVSLTDLI TAAAVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDL LKAYMPTWFQ DSKNFSFSDI KKTYELDRCH
901: LFC
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFASAAGKK SDSLPVFDDL GRDGDDLLFR DVFSGPPPKY GSSGDSRSPS APAFDYDVMF
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
Arabidopsis Description
Auxilin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQ57]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.